Gene : Pavir.1KG188100 P. virgatum v4.1
Defline:  (1 of 3) K13248 - pyridoxal phosphate phosphatase PHOSPHO2 (PHOSPHO2) Genomic Order:  1225
Name:  ? Pavir.1KG188100 Secondary Identifier:  ? PAC:37665979
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5083 Panicum virgatum pathologic  
Pvirgatum PWY-6348 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG188100 0.5kb upstream 0.5kb upstream 2323 true Chr01K: 13727602-13729924 Panicum virgatum
Pavir.1KG188100 0.5kb upstream 0.5kb upstream 500 false Chr01K: 13727602-13728101 Panicum virgatum
Pavir.1KG188100 0.5kb downstream 0.5kb downstream 2323 true Chr01K: 13728102-13730424 Panicum virgatum
Pavir.1KG188100 0.5kb downstream 0.5kb downstream 500 false Chr01K: 13729925-13730424 Panicum virgatum
Pavir.1KG188100 1.0kb upstream 1.0kb upstream 2823 true Chr01K: 13727102-13729924 Panicum virgatum
Pavir.1KG188100 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 13727102-13728101 Panicum virgatum
Pavir.1KG188100 1.0kb downstream 1.0kb downstream 2823 true Chr01K: 13728102-13730924 Panicum virgatum
Pavir.1KG188100 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 13729925-13730924 Panicum virgatum
Pavir.1KG188100 2.0kb upstream 2.0kb upstream 3823 true Chr01K: 13726102-13729924 Panicum virgatum
Pavir.1KG188100 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 13726102-13728101 Panicum virgatum
Pavir.1KG188100 2.0kb downstream 2.0kb downstream 3823 true Chr01K: 13728102-13731924 Panicum virgatum
Pavir.1KG188100 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 13729925-13731924 Panicum virgatum
Pavir.1KG188100 5.0kb upstream 5.0kb upstream 6823 true Chr01K: 13723102-13729924 Panicum virgatum
Pavir.1KG188100 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 13723102-13728101 Panicum virgatum
Pavir.1KG188100 5.0kb downstream 5.0kb downstream 6823 true Chr01K: 13728102-13734924 Panicum virgatum
Pavir.1KG188100 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 13729925-13734924 Panicum virgatum
Pavir.1KG188100 10.0kb upstream 10.0kb upstream 11823 true Chr01K: 13718102-13729924 Panicum virgatum
Pavir.1KG188100 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 13718102-13728101 Panicum virgatum
Pavir.1KG188100 10.0kb downstream 10.0kb downstream 11823 true Chr01K: 13728102-13739924 Panicum virgatum
Pavir.1KG188100 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 13729925-13739924 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122180505 5267 Panicoideae View MSA
124572114 5269 Grass View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain