Gene : Thecc1EG046802 T. cacao v1.1
Defline:  (1 of 4) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  2182
Name:  ? Thecc1EG046802 Secondary Identifier:  ? PAC:27424546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046802 0.5kb upstream 0.5kb upstream 2225 true scaffold_5: 33120985-33123209 Theobroma cacao
Thecc1EG046802 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33122710-33123209 Theobroma cacao
Thecc1EG046802 0.5kb downstream 0.5kb downstream 2225 true scaffold_5: 33120485-33122709 Theobroma cacao
Thecc1EG046802 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33120485-33120984 Theobroma cacao
Thecc1EG046802 1.0kb upstream 1.0kb upstream 2725 true scaffold_5: 33120985-33123709 Theobroma cacao
Thecc1EG046802 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33122710-33123709 Theobroma cacao
Thecc1EG046802 1.0kb downstream 1.0kb downstream 2725 true scaffold_5: 33119985-33122709 Theobroma cacao
Thecc1EG046802 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33119985-33120984 Theobroma cacao
Thecc1EG046802 2.0kb upstream 2.0kb upstream 3725 true scaffold_5: 33120985-33124709 Theobroma cacao
Thecc1EG046802 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33122710-33124709 Theobroma cacao
Thecc1EG046802 2.0kb downstream 2.0kb downstream 3725 true scaffold_5: 33118985-33122709 Theobroma cacao
Thecc1EG046802 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33118985-33120984 Theobroma cacao
Thecc1EG046802 5.0kb upstream 5.0kb upstream 6725 true scaffold_5: 33120985-33127709 Theobroma cacao
Thecc1EG046802 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33122710-33127709 Theobroma cacao
Thecc1EG046802 5.0kb downstream 5.0kb downstream 6725 true scaffold_5: 33115985-33122709 Theobroma cacao
Thecc1EG046802 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33115985-33120984 Theobroma cacao
Thecc1EG046802 10.0kb upstream 10.0kb upstream 11725 true scaffold_5: 33120985-33132709 Theobroma cacao
Thecc1EG046802 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33122710-33132709 Theobroma cacao
Thecc1EG046802 10.0kb downstream 10.0kb downstream 11725 true scaffold_5: 33110985-33122709 Theobroma cacao
Thecc1EG046802 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33110985-33120984 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819982 5264 Brassicales-Malvales Singleton cluster - no MSA
124316209 5266 SBM Singleton cluster - no MSA
124254605 5268 Malvidae View MSA
124074031 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain