Gene : Thecc1EG026845 T. cacao v1.1
Defline:  (1 of 8) PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  3272
Name:  ? Thecc1EG026845 Secondary Identifier:  ? PAC:27424952
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026845 0.5kb upstream 0.5kb upstream 1215 true scaffold_5: 40281262-40282476 Theobroma cacao
Thecc1EG026845 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40281977-40282476 Theobroma cacao
Thecc1EG026845 0.5kb downstream 0.5kb downstream 1215 true scaffold_5: 40280762-40281976 Theobroma cacao
Thecc1EG026845 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40280762-40281261 Theobroma cacao
Thecc1EG026845 1.0kb upstream 1.0kb upstream 1715 true scaffold_5: 40281262-40282976 Theobroma cacao
Thecc1EG026845 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40281977-40282976 Theobroma cacao
Thecc1EG026845 1.0kb downstream 1.0kb downstream 1715 true scaffold_5: 40280262-40281976 Theobroma cacao
Thecc1EG026845 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40280262-40281261 Theobroma cacao
Thecc1EG026845 2.0kb upstream 2.0kb upstream 2715 true scaffold_5: 40281262-40283976 Theobroma cacao
Thecc1EG026845 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40281977-40283976 Theobroma cacao
Thecc1EG026845 2.0kb downstream 2.0kb downstream 2715 true scaffold_5: 40279262-40281976 Theobroma cacao
Thecc1EG026845 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40279262-40281261 Theobroma cacao
Thecc1EG026845 5.0kb upstream 5.0kb upstream 5715 true scaffold_5: 40281262-40286976 Theobroma cacao
Thecc1EG026845 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40281977-40286976 Theobroma cacao
Thecc1EG026845 5.0kb downstream 5.0kb downstream 5715 true scaffold_5: 40276262-40281976 Theobroma cacao
Thecc1EG026845 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40276262-40281261 Theobroma cacao
Thecc1EG026845 10.0kb upstream 10.0kb upstream 10715 true scaffold_5: 40281262-40291976 Theobroma cacao
Thecc1EG026845 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40281977-40291976 Theobroma cacao
Thecc1EG026845 10.0kb downstream 10.0kb downstream 10715 true scaffold_5: 40271262-40281976 Theobroma cacao
Thecc1EG026845 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40271262-40281261 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain