Gene : Thecc1EG026814 T. cacao v1.1
Defline:  (1 of 1) K13152 - U11/U12 small nuclear ribonucleoprotein 20 kDa protein (ZMAT5) Genomic Order:  3247
Name:  ? Thecc1EG026814 Secondary Identifier:  ? PAC:27420972
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026814 0.5kb upstream 0.5kb upstream 1515 true scaffold_5: 40151824-40153338 Theobroma cacao
Thecc1EG026814 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40152839-40153338 Theobroma cacao
Thecc1EG026814 0.5kb downstream 0.5kb downstream 1515 true scaffold_5: 40151324-40152838 Theobroma cacao
Thecc1EG026814 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40151324-40151823 Theobroma cacao
Thecc1EG026814 1.0kb upstream 1.0kb upstream 2015 true scaffold_5: 40151824-40153838 Theobroma cacao
Thecc1EG026814 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40152839-40153838 Theobroma cacao
Thecc1EG026814 1.0kb downstream 1.0kb downstream 2015 true scaffold_5: 40150824-40152838 Theobroma cacao
Thecc1EG026814 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40150824-40151823 Theobroma cacao
Thecc1EG026814 2.0kb upstream 2.0kb upstream 3015 true scaffold_5: 40151824-40154838 Theobroma cacao
Thecc1EG026814 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40152839-40154838 Theobroma cacao
Thecc1EG026814 2.0kb downstream 2.0kb downstream 3015 true scaffold_5: 40149824-40152838 Theobroma cacao
Thecc1EG026814 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40149824-40151823 Theobroma cacao
Thecc1EG026814 5.0kb upstream 5.0kb upstream 6015 true scaffold_5: 40151824-40157838 Theobroma cacao
Thecc1EG026814 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40152839-40157838 Theobroma cacao
Thecc1EG026814 5.0kb downstream 5.0kb downstream 6015 true scaffold_5: 40146824-40152838 Theobroma cacao
Thecc1EG026814 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40146824-40151823 Theobroma cacao
Thecc1EG026814 10.0kb upstream 10.0kb upstream 11015 true scaffold_5: 40151824-40162838 Theobroma cacao
Thecc1EG026814 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40152839-40162838 Theobroma cacao
Thecc1EG026814 10.0kb downstream 10.0kb downstream 11015 true scaffold_5: 40141824-40152838 Theobroma cacao
Thecc1EG026814 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40141824-40151823 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831027 5264 Brassicales-Malvales View MSA
124344505 5266 SBM View MSA
124238271 5268 Malvidae View MSA
124062249 5270 Rosid View MSA
123737292 5271 Pentapetalae View MSA
122790425 5272 Eudicot View MSA
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain