Gene : Thecc1EG026900 T. cacao v1.1

Defline:  (1 of 1) PTHR12634//PTHR12634:SF17 - SIT4 YEAST -ASSOCIATING PROTEIN-RELATED // SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN Genomic Order:  11
Name:  ? Thecc1EG026900 Secondary Identifier:  ? PAC:27440462

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026900 0.5kb upstream 0.5kb upstream 18054 true scaffold_6: 205041-223094 Theobroma cacao
Thecc1EG026900 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 205041-205540 Theobroma cacao
Thecc1EG026900 0.5kb downstream 0.5kb downstream 18054 true scaffold_6: 205541-223594 Theobroma cacao
Thecc1EG026900 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 223095-223594 Theobroma cacao
Thecc1EG026900 1.0kb upstream 1.0kb upstream 18554 true scaffold_6: 204541-223094 Theobroma cacao
Thecc1EG026900 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 204541-205540 Theobroma cacao
Thecc1EG026900 1.0kb downstream 1.0kb downstream 18554 true scaffold_6: 205541-224094 Theobroma cacao
Thecc1EG026900 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 223095-224094 Theobroma cacao
Thecc1EG026900 2.0kb upstream 2.0kb upstream 19554 true scaffold_6: 203541-223094 Theobroma cacao
Thecc1EG026900 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 203541-205540 Theobroma cacao
Thecc1EG026900 2.0kb downstream 2.0kb downstream 19554 true scaffold_6: 205541-225094 Theobroma cacao
Thecc1EG026900 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 223095-225094 Theobroma cacao
Thecc1EG026900 5.0kb upstream 5.0kb upstream 22554 true scaffold_6: 200541-223094 Theobroma cacao
Thecc1EG026900 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 200541-205540 Theobroma cacao
Thecc1EG026900 5.0kb downstream 5.0kb downstream 22554 true scaffold_6: 205541-228094 Theobroma cacao
Thecc1EG026900 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 223095-228094 Theobroma cacao
Thecc1EG026900 10.0kb upstream 10.0kb upstream 27554 true scaffold_6: 195541-223094 Theobroma cacao
Thecc1EG026900 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 195541-205540 Theobroma cacao
Thecc1EG026900 10.0kb downstream 10.0kb downstream 27554 true scaffold_6: 205541-233094 Theobroma cacao
Thecc1EG026900 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 223095-233094 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836833 5264 Brassicales-Malvales View MSA
124346831 5266 SBM View MSA
124246856 5268 Malvidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain