Gene : Thecc1EG027482 T. cacao v1.1

Defline:  (1 of 1) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Genomic Order:  429
Name:  ? Thecc1EG027482 Secondary Identifier:  ? PAC:27438009

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027482 0.5kb upstream 0.5kb upstream 4125 true scaffold_6: 4323531-4327655 Theobroma cacao
Thecc1EG027482 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4323531-4324030 Theobroma cacao
Thecc1EG027482 0.5kb downstream 0.5kb downstream 4125 true scaffold_6: 4324031-4328155 Theobroma cacao
Thecc1EG027482 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4327656-4328155 Theobroma cacao
Thecc1EG027482 1.0kb upstream 1.0kb upstream 4625 true scaffold_6: 4323031-4327655 Theobroma cacao
Thecc1EG027482 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4323031-4324030 Theobroma cacao
Thecc1EG027482 1.0kb downstream 1.0kb downstream 4625 true scaffold_6: 4324031-4328655 Theobroma cacao
Thecc1EG027482 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4327656-4328655 Theobroma cacao
Thecc1EG027482 2.0kb upstream 2.0kb upstream 5625 true scaffold_6: 4322031-4327655 Theobroma cacao
Thecc1EG027482 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4322031-4324030 Theobroma cacao
Thecc1EG027482 2.0kb downstream 2.0kb downstream 5625 true scaffold_6: 4324031-4329655 Theobroma cacao
Thecc1EG027482 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4327656-4329655 Theobroma cacao
Thecc1EG027482 5.0kb upstream 5.0kb upstream 8625 true scaffold_6: 4319031-4327655 Theobroma cacao
Thecc1EG027482 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4319031-4324030 Theobroma cacao
Thecc1EG027482 5.0kb downstream 5.0kb downstream 8625 true scaffold_6: 4324031-4332655 Theobroma cacao
Thecc1EG027482 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4327656-4332655 Theobroma cacao
Thecc1EG027482 10.0kb upstream 10.0kb upstream 13625 true scaffold_6: 4314031-4327655 Theobroma cacao
Thecc1EG027482 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4314031-4324030 Theobroma cacao
Thecc1EG027482 10.0kb downstream 10.0kb downstream 13625 true scaffold_6: 4324031-4337655 Theobroma cacao
Thecc1EG027482 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4327656-4337655 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826174 5264 Brassicales-Malvales View MSA
124348898 5266 SBM View MSA
124248835 5268 Malvidae View MSA
124071638 5270 Rosid View MSA
123747358 5271 Pentapetalae View MSA
122796482 5272 Eudicot View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain