Gene : Pavir.7KG345100 P. virgatum v4.1
Defline:  (1 of 3) K00228 - coproporphyrinogen III oxidase (CPOX, hemF) Genomic Order:  3119
Name:  ? Pavir.7KG345100 Secondary Identifier:  ? PAC:37689505
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CHLOROPHYLL-SYN Panicum virgatum pathologic  
Pvirgatum HEME-BIOSYNTHESIS-II Panicum virgatum pathologic  
Pvirgatum PWY-5918 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7KG345100 0.5kb upstream 0.5kb upstream 4853 true Chr07K: 66306674-66311526 Panicum virgatum
Pavir.7KG345100 0.5kb upstream 0.5kb upstream 500 false Chr07K: 66306674-66307173 Panicum virgatum
Pavir.7KG345100 0.5kb downstream 0.5kb downstream 4853 true Chr07K: 66307174-66312026 Panicum virgatum
Pavir.7KG345100 0.5kb downstream 0.5kb downstream 500 false Chr07K: 66311527-66312026 Panicum virgatum
Pavir.7KG345100 1.0kb upstream 1.0kb upstream 5353 true Chr07K: 66306174-66311526 Panicum virgatum
Pavir.7KG345100 1.0kb upstream 1.0kb upstream 1000 false Chr07K: 66306174-66307173 Panicum virgatum
Pavir.7KG345100 1.0kb downstream 1.0kb downstream 5353 true Chr07K: 66307174-66312526 Panicum virgatum
Pavir.7KG345100 1.0kb downstream 1.0kb downstream 1000 false Chr07K: 66311527-66312526 Panicum virgatum
Pavir.7KG345100 2.0kb upstream 2.0kb upstream 6353 true Chr07K: 66305174-66311526 Panicum virgatum
Pavir.7KG345100 2.0kb upstream 2.0kb upstream 2000 false Chr07K: 66305174-66307173 Panicum virgatum
Pavir.7KG345100 2.0kb downstream 2.0kb downstream 6353 true Chr07K: 66307174-66313526 Panicum virgatum
Pavir.7KG345100 2.0kb downstream 2.0kb downstream 2000 false Chr07K: 66311527-66313526 Panicum virgatum
Pavir.7KG345100 5.0kb upstream 5.0kb upstream 9353 true Chr07K: 66302174-66311526 Panicum virgatum
Pavir.7KG345100 5.0kb upstream 5.0kb upstream 5000 false Chr07K: 66302174-66307173 Panicum virgatum
Pavir.7KG345100 5.0kb downstream 5.0kb downstream 9353 true Chr07K: 66307174-66316526 Panicum virgatum
Pavir.7KG345100 5.0kb downstream 5.0kb downstream 5000 false Chr07K: 66311527-66316526 Panicum virgatum
Pavir.7KG345100 10.0kb upstream 10.0kb upstream 14353 true Chr07K: 66297174-66311526 Panicum virgatum
Pavir.7KG345100 10.0kb upstream 10.0kb upstream 10000 false Chr07K: 66297174-66307173 Panicum virgatum
Pavir.7KG345100 10.0kb downstream 10.0kb downstream 14353 true Chr07K: 66307174-66321526 Panicum virgatum
Pavir.7KG345100 10.0kb downstream 10.0kb downstream 10000 false Chr07K: 66311527-66321526 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183301 5267 Panicoideae View MSA
124572100 5269 Grass View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain