Gene : Pavir.7NG406000 P. virgatum v4.1
Defline:  (1 of 3) K00228 - coproporphyrinogen III oxidase (CPOX, hemF) Genomic Order:  3290
Name:  ? Pavir.7NG406000 Secondary Identifier:  ? PAC:37622819
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CHLOROPHYLL-SYN Panicum virgatum pathologic  
Pvirgatum HEME-BIOSYNTHESIS-II Panicum virgatum pathologic  
Pvirgatum PWY-5918 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7NG406000 0.5kb upstream 0.5kb upstream 4993 true Chr07N: 63041930-63046922 Panicum virgatum
Pavir.7NG406000 0.5kb upstream 0.5kb upstream 500 false Chr07N: 63041930-63042429 Panicum virgatum
Pavir.7NG406000 0.5kb downstream 0.5kb downstream 4993 true Chr07N: 63042430-63047422 Panicum virgatum
Pavir.7NG406000 0.5kb downstream 0.5kb downstream 500 false Chr07N: 63046923-63047422 Panicum virgatum
Pavir.7NG406000 1.0kb upstream 1.0kb upstream 5493 true Chr07N: 63041430-63046922 Panicum virgatum
Pavir.7NG406000 1.0kb upstream 1.0kb upstream 1000 false Chr07N: 63041430-63042429 Panicum virgatum
Pavir.7NG406000 1.0kb downstream 1.0kb downstream 5493 true Chr07N: 63042430-63047922 Panicum virgatum
Pavir.7NG406000 1.0kb downstream 1.0kb downstream 1000 false Chr07N: 63046923-63047922 Panicum virgatum
Pavir.7NG406000 2.0kb upstream 2.0kb upstream 6493 true Chr07N: 63040430-63046922 Panicum virgatum
Pavir.7NG406000 2.0kb upstream 2.0kb upstream 2000 false Chr07N: 63040430-63042429 Panicum virgatum
Pavir.7NG406000 2.0kb downstream 2.0kb downstream 6493 true Chr07N: 63042430-63048922 Panicum virgatum
Pavir.7NG406000 2.0kb downstream 2.0kb downstream 2000 false Chr07N: 63046923-63048922 Panicum virgatum
Pavir.7NG406000 5.0kb upstream 5.0kb upstream 9493 true Chr07N: 63037430-63046922 Panicum virgatum
Pavir.7NG406000 5.0kb upstream 5.0kb upstream 5000 false Chr07N: 63037430-63042429 Panicum virgatum
Pavir.7NG406000 5.0kb downstream 5.0kb downstream 9493 true Chr07N: 63042430-63051922 Panicum virgatum
Pavir.7NG406000 5.0kb downstream 5.0kb downstream 5000 false Chr07N: 63046923-63051922 Panicum virgatum
Pavir.7NG406000 10.0kb upstream 10.0kb upstream 14493 true Chr07N: 63032430-63046922 Panicum virgatum
Pavir.7NG406000 10.0kb upstream 10.0kb upstream 10000 false Chr07N: 63032430-63042429 Panicum virgatum
Pavir.7NG406000 10.0kb downstream 10.0kb downstream 14493 true Chr07N: 63042430-63056922 Panicum virgatum
Pavir.7NG406000 10.0kb downstream 10.0kb downstream 10000 false Chr07N: 63046923-63056922 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183301 5267 Panicoideae View MSA
124572100 5269 Grass View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain