Gene : Thecc1EG028039 T. cacao v1.1
Defline:  (1 of 1) PTHR31288//PTHR31288:SF5 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  648
Name:  ? Thecc1EG028039 Secondary Identifier:  ? PAC:27438057
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028039 0.5kb upstream 0.5kb upstream 5361 true scaffold_6: 10132718-10138078 Theobroma cacao
Thecc1EG028039 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 10132718-10133217 Theobroma cacao
Thecc1EG028039 0.5kb downstream 0.5kb downstream 5361 true scaffold_6: 10133218-10138578 Theobroma cacao
Thecc1EG028039 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 10138079-10138578 Theobroma cacao
Thecc1EG028039 1.0kb upstream 1.0kb upstream 5861 true scaffold_6: 10132218-10138078 Theobroma cacao
Thecc1EG028039 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 10132218-10133217 Theobroma cacao
Thecc1EG028039 1.0kb downstream 1.0kb downstream 5861 true scaffold_6: 10133218-10139078 Theobroma cacao
Thecc1EG028039 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 10138079-10139078 Theobroma cacao
Thecc1EG028039 2.0kb upstream 2.0kb upstream 6861 true scaffold_6: 10131218-10138078 Theobroma cacao
Thecc1EG028039 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 10131218-10133217 Theobroma cacao
Thecc1EG028039 2.0kb downstream 2.0kb downstream 6861 true scaffold_6: 10133218-10140078 Theobroma cacao
Thecc1EG028039 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 10138079-10140078 Theobroma cacao
Thecc1EG028039 5.0kb upstream 5.0kb upstream 9861 true scaffold_6: 10128218-10138078 Theobroma cacao
Thecc1EG028039 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 10128218-10133217 Theobroma cacao
Thecc1EG028039 5.0kb downstream 5.0kb downstream 9861 true scaffold_6: 10133218-10143078 Theobroma cacao
Thecc1EG028039 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 10138079-10143078 Theobroma cacao
Thecc1EG028039 10.0kb upstream 10.0kb upstream 14861 true scaffold_6: 10123218-10138078 Theobroma cacao
Thecc1EG028039 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 10123218-10133217 Theobroma cacao
Thecc1EG028039 10.0kb downstream 10.0kb downstream 14861 true scaffold_6: 10133218-10148078 Theobroma cacao
Thecc1EG028039 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 10138079-10148078 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
123837484 5264 Brassicales-Malvales View MSA
124346033 5266 SBM View MSA
124238517 5268 Malvidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain