Gene : Pavir.8NG016400 P. virgatum v4.1
Defline:  (1 of 8) 1.1.1.3 - Homoserine dehydrogenase Genomic Order:  157
Name:  ? Pavir.8NG016400 Secondary Identifier:  ? PAC:37626284
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HOMOSERSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum PWY-724 Panicum virgatum pathologic  
Pvirgatum THRESYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG016400 0.5kb upstream 0.5kb upstream 5205 true Chr08N: 2666152-2671356 Panicum virgatum
Pavir.8NG016400 0.5kb upstream 0.5kb upstream 500 false Chr08N: 2666152-2666651 Panicum virgatum
Pavir.8NG016400 0.5kb downstream 0.5kb downstream 5205 true Chr08N: 2666652-2671856 Panicum virgatum
Pavir.8NG016400 0.5kb downstream 0.5kb downstream 500 false Chr08N: 2671357-2671856 Panicum virgatum
Pavir.8NG016400 1.0kb upstream 1.0kb upstream 5705 true Chr08N: 2665652-2671356 Panicum virgatum
Pavir.8NG016400 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 2665652-2666651 Panicum virgatum
Pavir.8NG016400 1.0kb downstream 1.0kb downstream 5705 true Chr08N: 2666652-2672356 Panicum virgatum
Pavir.8NG016400 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 2671357-2672356 Panicum virgatum
Pavir.8NG016400 2.0kb upstream 2.0kb upstream 6705 true Chr08N: 2664652-2671356 Panicum virgatum
Pavir.8NG016400 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 2664652-2666651 Panicum virgatum
Pavir.8NG016400 2.0kb downstream 2.0kb downstream 6705 true Chr08N: 2666652-2673356 Panicum virgatum
Pavir.8NG016400 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 2671357-2673356 Panicum virgatum
Pavir.8NG016400 5.0kb upstream 5.0kb upstream 9705 true Chr08N: 2661652-2671356 Panicum virgatum
Pavir.8NG016400 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 2661652-2666651 Panicum virgatum
Pavir.8NG016400 5.0kb downstream 5.0kb downstream 9705 true Chr08N: 2666652-2676356 Panicum virgatum
Pavir.8NG016400 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 2671357-2676356 Panicum virgatum
Pavir.8NG016400 10.0kb upstream 10.0kb upstream 14705 true Chr08N: 2656652-2671356 Panicum virgatum
Pavir.8NG016400 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 2656652-2666651 Panicum virgatum
Pavir.8NG016400 10.0kb downstream 10.0kb downstream 14705 true Chr08N: 2666652-2681356 Panicum virgatum
Pavir.8NG016400 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 2671357-2681356 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188388 5267 Panicoideae View MSA
124571730 5269 Grass View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain