Gene : Pavir.8NG024900 P. virgatum v4.1
Defline:  (1 of 2) KOG0803 - Predicted E3 ubiquitin ligase Genomic Order:  238
Name:  ? Pavir.8NG024900 Secondary Identifier:  ? PAC:37623864
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG024900 0.5kb upstream 0.5kb upstream 12980 true Chr08N: 3361897-3374876 Panicum virgatum
Pavir.8NG024900 0.5kb upstream 0.5kb upstream 500 false Chr08N: 3361897-3362396 Panicum virgatum
Pavir.8NG024900 0.5kb downstream 0.5kb downstream 12980 true Chr08N: 3362397-3375376 Panicum virgatum
Pavir.8NG024900 0.5kb downstream 0.5kb downstream 500 false Chr08N: 3374877-3375376 Panicum virgatum
Pavir.8NG024900 1.0kb upstream 1.0kb upstream 13480 true Chr08N: 3361397-3374876 Panicum virgatum
Pavir.8NG024900 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 3361397-3362396 Panicum virgatum
Pavir.8NG024900 1.0kb downstream 1.0kb downstream 13480 true Chr08N: 3362397-3375876 Panicum virgatum
Pavir.8NG024900 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 3374877-3375876 Panicum virgatum
Pavir.8NG024900 2.0kb upstream 2.0kb upstream 14480 true Chr08N: 3360397-3374876 Panicum virgatum
Pavir.8NG024900 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 3360397-3362396 Panicum virgatum
Pavir.8NG024900 2.0kb downstream 2.0kb downstream 14480 true Chr08N: 3362397-3376876 Panicum virgatum
Pavir.8NG024900 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 3374877-3376876 Panicum virgatum
Pavir.8NG024900 5.0kb upstream 5.0kb upstream 17480 true Chr08N: 3357397-3374876 Panicum virgatum
Pavir.8NG024900 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 3357397-3362396 Panicum virgatum
Pavir.8NG024900 5.0kb downstream 5.0kb downstream 17480 true Chr08N: 3362397-3379876 Panicum virgatum
Pavir.8NG024900 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 3374877-3379876 Panicum virgatum
Pavir.8NG024900 10.0kb upstream 10.0kb upstream 22480 true Chr08N: 3352397-3374876 Panicum virgatum
Pavir.8NG024900 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 3352397-3362396 Panicum virgatum
Pavir.8NG024900 10.0kb downstream 10.0kb downstream 22480 true Chr08N: 3362397-3384876 Panicum virgatum
Pavir.8NG024900 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 3374877-3384876 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122092156 5267 Panicoideae Singleton cluster - no MSA
124389600 5269 Grass Singleton cluster - no MSA
122043227 5273 Angiosperm View MSA
121344406 5274 Embryophyte View MSA
123424491 5275 Viridiplantae View MSA

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