Gene : Thecc1EG028630 T. cacao v1.1

Defline:  (1 of 1) PTHR12526//PTHR12526:SF160 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  848
Name:  ? Thecc1EG028630 Secondary Identifier:  ? PAC:27438924

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028630 0.5kb upstream 0.5kb upstream 6881 true scaffold_6: 16927699-16934579 Theobroma cacao
Thecc1EG028630 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16934080-16934579 Theobroma cacao
Thecc1EG028630 0.5kb downstream 0.5kb downstream 6881 true scaffold_6: 16927199-16934079 Theobroma cacao
Thecc1EG028630 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16927199-16927698 Theobroma cacao
Thecc1EG028630 1.0kb upstream 1.0kb upstream 7381 true scaffold_6: 16927699-16935079 Theobroma cacao
Thecc1EG028630 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16934080-16935079 Theobroma cacao
Thecc1EG028630 1.0kb downstream 1.0kb downstream 7381 true scaffold_6: 16926699-16934079 Theobroma cacao
Thecc1EG028630 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16926699-16927698 Theobroma cacao
Thecc1EG028630 2.0kb upstream 2.0kb upstream 8381 true scaffold_6: 16927699-16936079 Theobroma cacao
Thecc1EG028630 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16934080-16936079 Theobroma cacao
Thecc1EG028630 2.0kb downstream 2.0kb downstream 8381 true scaffold_6: 16925699-16934079 Theobroma cacao
Thecc1EG028630 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16925699-16927698 Theobroma cacao
Thecc1EG028630 5.0kb upstream 5.0kb upstream 11381 true scaffold_6: 16927699-16939079 Theobroma cacao
Thecc1EG028630 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16934080-16939079 Theobroma cacao
Thecc1EG028630 5.0kb downstream 5.0kb downstream 11381 true scaffold_6: 16922699-16934079 Theobroma cacao
Thecc1EG028630 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16922699-16927698 Theobroma cacao
Thecc1EG028630 10.0kb upstream 10.0kb upstream 16381 true scaffold_6: 16927699-16944079 Theobroma cacao
Thecc1EG028630 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16934080-16944079 Theobroma cacao
Thecc1EG028630 10.0kb downstream 10.0kb downstream 16381 true scaffold_6: 16917699-16934079 Theobroma cacao
Thecc1EG028630 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16917699-16927698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836336 5264 Brassicales-Malvales View MSA
124346758 5266 SBM View MSA
124239792 5268 Malvidae View MSA
124068534 5270 Rosid View MSA
123748931 5271 Pentapetalae View MSA
122790336 5272 Eudicot View MSA
122046924 5273 Angiosperm View MSA
121347329 5274 Embryophyte View MSA
123380528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain