Gene : Pavir.8NG218700 P. virgatum v4.1
Defline:  (1 of 8) PTHR12300//PTHR12300:SF56 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1601
Name:  ? Pavir.8NG218700 Secondary Identifier:  ? PAC:37627114
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG218700 0.5kb upstream 0.5kb upstream 1515 true Chr08N: 43049668-43051182 Panicum virgatum
Pavir.8NG218700 0.5kb upstream 0.5kb upstream 500 false Chr08N: 43050683-43051182 Panicum virgatum
Pavir.8NG218700 0.5kb downstream 0.5kb downstream 1515 true Chr08N: 43049168-43050682 Panicum virgatum
Pavir.8NG218700 0.5kb downstream 0.5kb downstream 500 false Chr08N: 43049168-43049667 Panicum virgatum
Pavir.8NG218700 1.0kb upstream 1.0kb upstream 2015 true Chr08N: 43049668-43051682 Panicum virgatum
Pavir.8NG218700 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 43050683-43051682 Panicum virgatum
Pavir.8NG218700 1.0kb downstream 1.0kb downstream 2015 true Chr08N: 43048668-43050682 Panicum virgatum
Pavir.8NG218700 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 43048668-43049667 Panicum virgatum
Pavir.8NG218700 2.0kb upstream 2.0kb upstream 3015 true Chr08N: 43049668-43052682 Panicum virgatum
Pavir.8NG218700 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 43050683-43052682 Panicum virgatum
Pavir.8NG218700 2.0kb downstream 2.0kb downstream 3015 true Chr08N: 43047668-43050682 Panicum virgatum
Pavir.8NG218700 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 43047668-43049667 Panicum virgatum
Pavir.8NG218700 5.0kb upstream 5.0kb upstream 6015 true Chr08N: 43049668-43055682 Panicum virgatum
Pavir.8NG218700 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 43050683-43055682 Panicum virgatum
Pavir.8NG218700 5.0kb downstream 5.0kb downstream 6015 true Chr08N: 43044668-43050682 Panicum virgatum
Pavir.8NG218700 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 43044668-43049667 Panicum virgatum
Pavir.8NG218700 10.0kb upstream 10.0kb upstream 11015 true Chr08N: 43049668-43060682 Panicum virgatum
Pavir.8NG218700 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 43050683-43060682 Panicum virgatum
Pavir.8NG218700 10.0kb downstream 10.0kb downstream 11015 true Chr08N: 43039668-43050682 Panicum virgatum
Pavir.8NG218700 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 43039668-43049667 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026833 5273 Angiosperm View MSA
122093140 5267 Panicoideae Singleton cluster - no MSA
124390490 5269 Grass Singleton cluster - no MSA
121296596 5274 Embryophyte View MSA
123334735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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