Gene : Pavir.8NG198800 P. virgatum v4.1
Defline:  (1 of 3) PTHR11177//PTHR11177:SF163 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  1431
Name:  ? Pavir.8NG198800 Secondary Identifier:  ? PAC:37624944
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6902 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG198800 0.5kb upstream 0.5kb upstream 2283 true Chr08N: 34950371-34952653 Panicum virgatum
Pavir.8NG198800 0.5kb upstream 0.5kb upstream 500 false Chr08N: 34950371-34950870 Panicum virgatum
Pavir.8NG198800 0.5kb downstream 0.5kb downstream 2283 true Chr08N: 34950871-34953153 Panicum virgatum
Pavir.8NG198800 0.5kb downstream 0.5kb downstream 500 false Chr08N: 34952654-34953153 Panicum virgatum
Pavir.8NG198800 1.0kb upstream 1.0kb upstream 2783 true Chr08N: 34949871-34952653 Panicum virgatum
Pavir.8NG198800 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 34949871-34950870 Panicum virgatum
Pavir.8NG198800 1.0kb downstream 1.0kb downstream 2783 true Chr08N: 34950871-34953653 Panicum virgatum
Pavir.8NG198800 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 34952654-34953653 Panicum virgatum
Pavir.8NG198800 2.0kb upstream 2.0kb upstream 3783 true Chr08N: 34948871-34952653 Panicum virgatum
Pavir.8NG198800 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 34948871-34950870 Panicum virgatum
Pavir.8NG198800 2.0kb downstream 2.0kb downstream 3783 true Chr08N: 34950871-34954653 Panicum virgatum
Pavir.8NG198800 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 34952654-34954653 Panicum virgatum
Pavir.8NG198800 5.0kb upstream 5.0kb upstream 6783 true Chr08N: 34945871-34952653 Panicum virgatum
Pavir.8NG198800 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 34945871-34950870 Panicum virgatum
Pavir.8NG198800 5.0kb downstream 5.0kb downstream 6783 true Chr08N: 34950871-34957653 Panicum virgatum
Pavir.8NG198800 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 34952654-34957653 Panicum virgatum
Pavir.8NG198800 10.0kb upstream 10.0kb upstream 11783 true Chr08N: 34940871-34952653 Panicum virgatum
Pavir.8NG198800 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 34940871-34950870 Panicum virgatum
Pavir.8NG198800 10.0kb downstream 10.0kb downstream 11783 true Chr08N: 34950871-34962653 Panicum virgatum
Pavir.8NG198800 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 34952654-34962653 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122092500 5267 Panicoideae Singleton cluster - no MSA
124389910 5269 Grass Singleton cluster - no MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain