Gene : Pavir.8NG272000 P. virgatum v4.1
Defline:  (1 of 11) K01114 - phospholipase C (plcC) Genomic Order:  2432
Name:  ? Pavir.8NG272000 Secondary Identifier:  ? PAC:37625035
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LIPASYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG272000 0.5kb upstream 0.5kb upstream 4753 true Chr08N: 61694435-61699187 Panicum virgatum
Pavir.8NG272000 0.5kb upstream 0.5kb upstream 500 false Chr08N: 61698688-61699187 Panicum virgatum
Pavir.8NG272000 0.5kb downstream 0.5kb downstream 4753 true Chr08N: 61693935-61698687 Panicum virgatum
Pavir.8NG272000 0.5kb downstream 0.5kb downstream 500 false Chr08N: 61693935-61694434 Panicum virgatum
Pavir.8NG272000 1.0kb upstream 1.0kb upstream 5253 true Chr08N: 61694435-61699687 Panicum virgatum
Pavir.8NG272000 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 61698688-61699687 Panicum virgatum
Pavir.8NG272000 1.0kb downstream 1.0kb downstream 5253 true Chr08N: 61693435-61698687 Panicum virgatum
Pavir.8NG272000 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 61693435-61694434 Panicum virgatum
Pavir.8NG272000 2.0kb upstream 2.0kb upstream 6253 true Chr08N: 61694435-61700687 Panicum virgatum
Pavir.8NG272000 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 61698688-61700687 Panicum virgatum
Pavir.8NG272000 2.0kb downstream 2.0kb downstream 6253 true Chr08N: 61692435-61698687 Panicum virgatum
Pavir.8NG272000 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 61692435-61694434 Panicum virgatum
Pavir.8NG272000 5.0kb upstream 5.0kb upstream 9253 true Chr08N: 61694435-61703687 Panicum virgatum
Pavir.8NG272000 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 61698688-61703687 Panicum virgatum
Pavir.8NG272000 5.0kb downstream 5.0kb downstream 9253 true Chr08N: 61689435-61698687 Panicum virgatum
Pavir.8NG272000 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 61689435-61694434 Panicum virgatum
Pavir.8NG272000 10.0kb upstream 10.0kb upstream 14253 true Chr08N: 61694435-61708687 Panicum virgatum
Pavir.8NG272000 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 61698688-61708687 Panicum virgatum
Pavir.8NG272000 10.0kb downstream 10.0kb downstream 14253 true Chr08N: 61684435-61698687 Panicum virgatum
Pavir.8NG272000 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 61684435-61694434 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180412 5267 Panicoideae View MSA
124587656 5269 Grass View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain