Gene : Thecc1EG028858 T. cacao v1.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF118 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  974
Name:  ? Thecc1EG028858 Secondary Identifier:  ? PAC:27437853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028858 0.5kb upstream 0.5kb upstream 3221 true scaffold_6: 18908794-18912014 Theobroma cacao
Thecc1EG028858 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 18911515-18912014 Theobroma cacao
Thecc1EG028858 0.5kb downstream 0.5kb downstream 3221 true scaffold_6: 18908294-18911514 Theobroma cacao
Thecc1EG028858 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 18908294-18908793 Theobroma cacao
Thecc1EG028858 1.0kb upstream 1.0kb upstream 3721 true scaffold_6: 18908794-18912514 Theobroma cacao
Thecc1EG028858 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 18911515-18912514 Theobroma cacao
Thecc1EG028858 1.0kb downstream 1.0kb downstream 3721 true scaffold_6: 18907794-18911514 Theobroma cacao
Thecc1EG028858 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 18907794-18908793 Theobroma cacao
Thecc1EG028858 2.0kb upstream 2.0kb upstream 4721 true scaffold_6: 18908794-18913514 Theobroma cacao
Thecc1EG028858 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 18911515-18913514 Theobroma cacao
Thecc1EG028858 2.0kb downstream 2.0kb downstream 4721 true scaffold_6: 18906794-18911514 Theobroma cacao
Thecc1EG028858 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 18906794-18908793 Theobroma cacao
Thecc1EG028858 5.0kb upstream 5.0kb upstream 7721 true scaffold_6: 18908794-18916514 Theobroma cacao
Thecc1EG028858 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 18911515-18916514 Theobroma cacao
Thecc1EG028858 5.0kb downstream 5.0kb downstream 7721 true scaffold_6: 18903794-18911514 Theobroma cacao
Thecc1EG028858 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 18903794-18908793 Theobroma cacao
Thecc1EG028858 10.0kb upstream 10.0kb upstream 12721 true scaffold_6: 18908794-18921514 Theobroma cacao
Thecc1EG028858 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 18911515-18921514 Theobroma cacao
Thecc1EG028858 10.0kb downstream 10.0kb downstream 12721 true scaffold_6: 18898794-18911514 Theobroma cacao
Thecc1EG028858 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 18898794-18908793 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829051 5264 Brassicales-Malvales View MSA
124343904 5266 SBM View MSA
124243184 5268 Malvidae View MSA
124065281 5270 Rosid View MSA
123748038 5271 Pentapetalae View MSA
122791744 5272 Eudicot View MSA
122049274 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain