Gene : Thecc1EG029321 T. cacao v1.1
Defline:  (1 of 2) PTHR31719//PTHR31719:SF5 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 6-RELATED Genomic Order:  1351
Name:  ? Thecc1EG029321 Secondary Identifier:  ? PAC:27441063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029321 0.5kb upstream 0.5kb upstream 2861 true scaffold_6: 21997129-21999989 Theobroma cacao
Thecc1EG029321 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21999490-21999989 Theobroma cacao
Thecc1EG029321 0.5kb downstream 0.5kb downstream 2861 true scaffold_6: 21996629-21999489 Theobroma cacao
Thecc1EG029321 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21996629-21997128 Theobroma cacao
Thecc1EG029321 1.0kb upstream 1.0kb upstream 3361 true scaffold_6: 21997129-22000489 Theobroma cacao
Thecc1EG029321 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21999490-22000489 Theobroma cacao
Thecc1EG029321 1.0kb downstream 1.0kb downstream 3361 true scaffold_6: 21996129-21999489 Theobroma cacao
Thecc1EG029321 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21996129-21997128 Theobroma cacao
Thecc1EG029321 2.0kb upstream 2.0kb upstream 4361 true scaffold_6: 21997129-22001489 Theobroma cacao
Thecc1EG029321 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21999490-22001489 Theobroma cacao
Thecc1EG029321 2.0kb downstream 2.0kb downstream 4361 true scaffold_6: 21995129-21999489 Theobroma cacao
Thecc1EG029321 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21995129-21997128 Theobroma cacao
Thecc1EG029321 5.0kb upstream 5.0kb upstream 7361 true scaffold_6: 21997129-22004489 Theobroma cacao
Thecc1EG029321 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21999490-22004489 Theobroma cacao
Thecc1EG029321 5.0kb downstream 5.0kb downstream 7361 true scaffold_6: 21992129-21999489 Theobroma cacao
Thecc1EG029321 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21992129-21997128 Theobroma cacao
Thecc1EG029321 10.0kb upstream 10.0kb upstream 12361 true scaffold_6: 21997129-22009489 Theobroma cacao
Thecc1EG029321 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21999490-22009489 Theobroma cacao
Thecc1EG029321 10.0kb downstream 10.0kb downstream 12361 true scaffold_6: 21987129-21999489 Theobroma cacao
Thecc1EG029321 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21987129-21997128 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
123825654 5264 Brassicales-Malvales View MSA
124320697 5266 SBM View MSA
124249315 5268 Malvidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain