Gene : Thecc1EG029502 T. cacao v1.1
Defline:  (1 of 2) PTHR10052//PTHR10052:SF9 - 60S RIBOSOMAL PROTEIN L18A // SUBFAMILY NOT NAMED Genomic Order:  1497
Name:  ? Thecc1EG029502 Secondary Identifier:  ? PAC:27440987
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029502 0.5kb upstream 0.5kb upstream 3624 true scaffold_6: 22966302-22969925 Theobroma cacao
Thecc1EG029502 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22966302-22966801 Theobroma cacao
Thecc1EG029502 0.5kb downstream 0.5kb downstream 3624 true scaffold_6: 22966802-22970425 Theobroma cacao
Thecc1EG029502 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22969926-22970425 Theobroma cacao
Thecc1EG029502 1.0kb upstream 1.0kb upstream 4124 true scaffold_6: 22965802-22969925 Theobroma cacao
Thecc1EG029502 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22965802-22966801 Theobroma cacao
Thecc1EG029502 1.0kb downstream 1.0kb downstream 4124 true scaffold_6: 22966802-22970925 Theobroma cacao
Thecc1EG029502 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22969926-22970925 Theobroma cacao
Thecc1EG029502 2.0kb upstream 2.0kb upstream 5124 true scaffold_6: 22964802-22969925 Theobroma cacao
Thecc1EG029502 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22964802-22966801 Theobroma cacao
Thecc1EG029502 2.0kb downstream 2.0kb downstream 5124 true scaffold_6: 22966802-22971925 Theobroma cacao
Thecc1EG029502 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22969926-22971925 Theobroma cacao
Thecc1EG029502 5.0kb upstream 5.0kb upstream 8124 true scaffold_6: 22961802-22969925 Theobroma cacao
Thecc1EG029502 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22961802-22966801 Theobroma cacao
Thecc1EG029502 5.0kb downstream 5.0kb downstream 8124 true scaffold_6: 22966802-22974925 Theobroma cacao
Thecc1EG029502 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22969926-22974925 Theobroma cacao
Thecc1EG029502 10.0kb upstream 10.0kb upstream 13124 true scaffold_6: 22956802-22969925 Theobroma cacao
Thecc1EG029502 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22956802-22966801 Theobroma cacao
Thecc1EG029502 10.0kb downstream 10.0kb downstream 13124 true scaffold_6: 22966802-22979925 Theobroma cacao
Thecc1EG029502 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22969926-22979925 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123821339 5264 Brassicales-Malvales Singleton cluster - no MSA
124349045 5266 SBM View MSA
124249811 5268 Malvidae View MSA
124074454 5270 Rosid View MSA
123749667 5271 Pentapetalae View MSA
122791619 5272 Eudicot View MSA
122042118 5273 Angiosperm View MSA
121350772 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain