Gene : Thecc1EG029419 T. cacao v1.1
Defline:  (1 of 1) PTHR13068:SF6 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  1429
Name:  ? Thecc1EG029419 Secondary Identifier:  ? PAC:27438259
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029419 0.5kb upstream 0.5kb upstream 4733 true scaffold_6: 22534467-22539199 Theobroma cacao
Thecc1EG029419 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22538700-22539199 Theobroma cacao
Thecc1EG029419 0.5kb downstream 0.5kb downstream 4733 true scaffold_6: 22533967-22538699 Theobroma cacao
Thecc1EG029419 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22533967-22534466 Theobroma cacao
Thecc1EG029419 1.0kb upstream 1.0kb upstream 5233 true scaffold_6: 22534467-22539699 Theobroma cacao
Thecc1EG029419 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22538700-22539699 Theobroma cacao
Thecc1EG029419 1.0kb downstream 1.0kb downstream 5233 true scaffold_6: 22533467-22538699 Theobroma cacao
Thecc1EG029419 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22533467-22534466 Theobroma cacao
Thecc1EG029419 2.0kb upstream 2.0kb upstream 6233 true scaffold_6: 22534467-22540699 Theobroma cacao
Thecc1EG029419 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22538700-22540699 Theobroma cacao
Thecc1EG029419 2.0kb downstream 2.0kb downstream 6233 true scaffold_6: 22532467-22538699 Theobroma cacao
Thecc1EG029419 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22532467-22534466 Theobroma cacao
Thecc1EG029419 5.0kb upstream 5.0kb upstream 9233 true scaffold_6: 22534467-22543699 Theobroma cacao
Thecc1EG029419 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22538700-22543699 Theobroma cacao
Thecc1EG029419 5.0kb downstream 5.0kb downstream 9233 true scaffold_6: 22529467-22538699 Theobroma cacao
Thecc1EG029419 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22529467-22534466 Theobroma cacao
Thecc1EG029419 10.0kb upstream 10.0kb upstream 14233 true scaffold_6: 22534467-22548699 Theobroma cacao
Thecc1EG029419 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22538700-22548699 Theobroma cacao
Thecc1EG029419 10.0kb downstream 10.0kb downstream 14233 true scaffold_6: 22524467-22538699 Theobroma cacao
Thecc1EG029419 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22524467-22534466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828633 5264 Brassicales-Malvales View MSA
124341586 5266 SBM View MSA
124241343 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain