Gene : Thecc1EG029603 T. cacao v1.1
Defline:  (1 of 1) PTHR33199:SF3 - MACPF DOMAIN-CONTAINING PROTEIN CAD1 Genomic Order:  1587
Name:  ? Thecc1EG029603 Secondary Identifier:  ? PAC:27440366
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029603 0.5kb upstream 0.5kb upstream 6375 true scaffold_6: 23407159-23413533 Theobroma cacao
Thecc1EG029603 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23413034-23413533 Theobroma cacao
Thecc1EG029603 0.5kb downstream 0.5kb downstream 6375 true scaffold_6: 23406659-23413033 Theobroma cacao
Thecc1EG029603 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23406659-23407158 Theobroma cacao
Thecc1EG029603 1.0kb upstream 1.0kb upstream 6875 true scaffold_6: 23407159-23414033 Theobroma cacao
Thecc1EG029603 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23413034-23414033 Theobroma cacao
Thecc1EG029603 1.0kb downstream 1.0kb downstream 6875 true scaffold_6: 23406159-23413033 Theobroma cacao
Thecc1EG029603 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23406159-23407158 Theobroma cacao
Thecc1EG029603 2.0kb upstream 2.0kb upstream 7875 true scaffold_6: 23407159-23415033 Theobroma cacao
Thecc1EG029603 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23413034-23415033 Theobroma cacao
Thecc1EG029603 2.0kb downstream 2.0kb downstream 7875 true scaffold_6: 23405159-23413033 Theobroma cacao
Thecc1EG029603 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23405159-23407158 Theobroma cacao
Thecc1EG029603 5.0kb upstream 5.0kb upstream 10875 true scaffold_6: 23407159-23418033 Theobroma cacao
Thecc1EG029603 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23413034-23418033 Theobroma cacao
Thecc1EG029603 5.0kb downstream 5.0kb downstream 10875 true scaffold_6: 23402159-23413033 Theobroma cacao
Thecc1EG029603 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23402159-23407158 Theobroma cacao
Thecc1EG029603 10.0kb upstream 10.0kb upstream 15875 true scaffold_6: 23407159-23423033 Theobroma cacao
Thecc1EG029603 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23413034-23423033 Theobroma cacao
Thecc1EG029603 10.0kb downstream 10.0kb downstream 15875 true scaffold_6: 23397159-23413033 Theobroma cacao
Thecc1EG029603 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23397159-23407158 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830293 5264 Brassicales-Malvales View MSA
124347308 5266 SBM View MSA
124245420 5268 Malvidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain