Gene : Thecc1EG029601 T. cacao v1.1
Defline:  (1 of 1) PF06884//PF07823 - Protein of unknown function (DUF1264) (DUF1264) // Cyclic phosphodiesterase-like protein (CPDase) Genomic Order:  1585
Name:  ? Thecc1EG029601 Secondary Identifier:  ? PAC:27440286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029601 0.5kb upstream 0.5kb upstream 4652 true scaffold_6: 23396955-23401606 Theobroma cacao
Thecc1EG029601 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23401107-23401606 Theobroma cacao
Thecc1EG029601 0.5kb downstream 0.5kb downstream 4652 true scaffold_6: 23396455-23401106 Theobroma cacao
Thecc1EG029601 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23396455-23396954 Theobroma cacao
Thecc1EG029601 1.0kb upstream 1.0kb upstream 5152 true scaffold_6: 23396955-23402106 Theobroma cacao
Thecc1EG029601 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23401107-23402106 Theobroma cacao
Thecc1EG029601 1.0kb downstream 1.0kb downstream 5152 true scaffold_6: 23395955-23401106 Theobroma cacao
Thecc1EG029601 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23395955-23396954 Theobroma cacao
Thecc1EG029601 2.0kb upstream 2.0kb upstream 6152 true scaffold_6: 23396955-23403106 Theobroma cacao
Thecc1EG029601 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23401107-23403106 Theobroma cacao
Thecc1EG029601 2.0kb downstream 2.0kb downstream 6152 true scaffold_6: 23394955-23401106 Theobroma cacao
Thecc1EG029601 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23394955-23396954 Theobroma cacao
Thecc1EG029601 5.0kb upstream 5.0kb upstream 9152 true scaffold_6: 23396955-23406106 Theobroma cacao
Thecc1EG029601 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23401107-23406106 Theobroma cacao
Thecc1EG029601 5.0kb downstream 5.0kb downstream 9152 true scaffold_6: 23391955-23401106 Theobroma cacao
Thecc1EG029601 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23391955-23396954 Theobroma cacao
Thecc1EG029601 10.0kb upstream 10.0kb upstream 14152 true scaffold_6: 23396955-23411106 Theobroma cacao
Thecc1EG029601 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23401107-23411106 Theobroma cacao
Thecc1EG029601 10.0kb downstream 10.0kb downstream 14152 true scaffold_6: 23386955-23401106 Theobroma cacao
Thecc1EG029601 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23386955-23396954 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121523027 5273 Angiosperm Singleton cluster - no MSA
123821216 5264 Brassicales-Malvales Singleton cluster - no MSA
124317403 5266 SBM Singleton cluster - no MSA
124166137 5268 Malvidae Singleton cluster - no MSA
123889759 5270 Rosid Singleton cluster - no MSA
123472118 5271 Pentapetalae Singleton cluster - no MSA
122507406 5272 Eudicot Singleton cluster - no MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain