Gene : Thecc1EG029570 T. cacao v1.1

Defline:  Uncharacterized protein (25%U) Genomic Order:  1556
Name:  ? Thecc1EG029570 Secondary Identifier:  ? PAC:27439967

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029570 0.5kb upstream 0.5kb upstream 3928 true scaffold_6: 23237600-23241527 Theobroma cacao
Thecc1EG029570 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23241028-23241527 Theobroma cacao
Thecc1EG029570 0.5kb downstream 0.5kb downstream 3928 true scaffold_6: 23237100-23241027 Theobroma cacao
Thecc1EG029570 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23237100-23237599 Theobroma cacao
Thecc1EG029570 1.0kb upstream 1.0kb upstream 4428 true scaffold_6: 23237600-23242027 Theobroma cacao
Thecc1EG029570 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23241028-23242027 Theobroma cacao
Thecc1EG029570 1.0kb downstream 1.0kb downstream 4428 true scaffold_6: 23236600-23241027 Theobroma cacao
Thecc1EG029570 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23236600-23237599 Theobroma cacao
Thecc1EG029570 2.0kb upstream 2.0kb upstream 5428 true scaffold_6: 23237600-23243027 Theobroma cacao
Thecc1EG029570 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23241028-23243027 Theobroma cacao
Thecc1EG029570 2.0kb downstream 2.0kb downstream 5428 true scaffold_6: 23235600-23241027 Theobroma cacao
Thecc1EG029570 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23235600-23237599 Theobroma cacao
Thecc1EG029570 5.0kb upstream 5.0kb upstream 8428 true scaffold_6: 23237600-23246027 Theobroma cacao
Thecc1EG029570 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23241028-23246027 Theobroma cacao
Thecc1EG029570 5.0kb downstream 5.0kb downstream 8428 true scaffold_6: 23232600-23241027 Theobroma cacao
Thecc1EG029570 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23232600-23237599 Theobroma cacao
Thecc1EG029570 10.0kb upstream 10.0kb upstream 13428 true scaffold_6: 23237600-23251027 Theobroma cacao
Thecc1EG029570 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23241028-23251027 Theobroma cacao
Thecc1EG029570 10.0kb downstream 10.0kb downstream 13428 true scaffold_6: 23227600-23241027 Theobroma cacao
Thecc1EG029570 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23227600-23237599 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026633 5273 Angiosperm View MSA
123838986 5264 Brassicales-Malvales View MSA
124341394 5266 SBM View MSA
124251054 5268 Malvidae View MSA
124073510 5270 Rosid View MSA
123746334 5271 Pentapetalae View MSA
122797876 5272 Eudicot View MSA
121296440 5274 Embryophyte View MSA
123334604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain