Gene : Pavir.J268300 P. virgatum v4.1
Defline:  (1 of 9) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) Genomic Order:  12
Name:  ? Pavir.J268300 Secondary Identifier:  ? PAC:37678544
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J268300 0.5kb upstream 0.5kb upstream 9484 true scaffold_22: 192086-201569 Panicum virgatum
Pavir.J268300 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 201070-201569 Panicum virgatum
Pavir.J268300 0.5kb downstream 0.5kb downstream 9484 true scaffold_22: 191586-201069 Panicum virgatum
Pavir.J268300 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 191586-192085 Panicum virgatum
Pavir.J268300 1.0kb upstream 1.0kb upstream 9984 true scaffold_22: 192086-202069 Panicum virgatum
Pavir.J268300 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 201070-202069 Panicum virgatum
Pavir.J268300 1.0kb downstream 1.0kb downstream 9984 true scaffold_22: 191086-201069 Panicum virgatum
Pavir.J268300 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 191086-192085 Panicum virgatum
Pavir.J268300 2.0kb upstream 2.0kb upstream 10984 true scaffold_22: 192086-203069 Panicum virgatum
Pavir.J268300 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 201070-203069 Panicum virgatum
Pavir.J268300 2.0kb downstream 2.0kb downstream 10984 true scaffold_22: 190086-201069 Panicum virgatum
Pavir.J268300 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 190086-192085 Panicum virgatum
Pavir.J268300 5.0kb upstream 5.0kb upstream 13984 true scaffold_22: 192086-206069 Panicum virgatum
Pavir.J268300 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 201070-206069 Panicum virgatum
Pavir.J268300 5.0kb downstream 5.0kb downstream 13984 true scaffold_22: 187086-201069 Panicum virgatum
Pavir.J268300 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 187086-192085 Panicum virgatum
Pavir.J268300 10.0kb upstream 10.0kb upstream 18984 true scaffold_22: 192086-211069 Panicum virgatum
Pavir.J268300 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 201070-211069 Panicum virgatum
Pavir.J268300 10.0kb downstream 10.0kb downstream 18984 true scaffold_22: 182086-201069 Panicum virgatum
Pavir.J268300 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 182086-192085 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122106785 5267 Panicoideae Singleton cluster - no MSA
124582971 5269 Grass View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain