Gene : Thecc1EG029939 T. cacao v1.1
Defline:  (1 of 2) PTHR11614//PTHR11614:SF20 - PHOSPHOLIPASE-RELATED // ALPHA/BETA-HYDROLASE-LIKE PROTEIN Genomic Order:  1892
Name:  ? Thecc1EG029939 Secondary Identifier:  ? PAC:27438305
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7420 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029939 0.5kb upstream 0.5kb upstream 1897 true scaffold_6: 25064168-25066064 Theobroma cacao
Thecc1EG029939 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25064168-25064667 Theobroma cacao
Thecc1EG029939 0.5kb downstream 0.5kb downstream 1897 true scaffold_6: 25064668-25066564 Theobroma cacao
Thecc1EG029939 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25066065-25066564 Theobroma cacao
Thecc1EG029939 1.0kb upstream 1.0kb upstream 2397 true scaffold_6: 25063668-25066064 Theobroma cacao
Thecc1EG029939 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25063668-25064667 Theobroma cacao
Thecc1EG029939 1.0kb downstream 1.0kb downstream 2397 true scaffold_6: 25064668-25067064 Theobroma cacao
Thecc1EG029939 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25066065-25067064 Theobroma cacao
Thecc1EG029939 2.0kb upstream 2.0kb upstream 3397 true scaffold_6: 25062668-25066064 Theobroma cacao
Thecc1EG029939 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25062668-25064667 Theobroma cacao
Thecc1EG029939 2.0kb downstream 2.0kb downstream 3397 true scaffold_6: 25064668-25068064 Theobroma cacao
Thecc1EG029939 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25066065-25068064 Theobroma cacao
Thecc1EG029939 5.0kb upstream 5.0kb upstream 6397 true scaffold_6: 25059668-25066064 Theobroma cacao
Thecc1EG029939 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25059668-25064667 Theobroma cacao
Thecc1EG029939 5.0kb downstream 5.0kb downstream 6397 true scaffold_6: 25064668-25071064 Theobroma cacao
Thecc1EG029939 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25066065-25071064 Theobroma cacao
Thecc1EG029939 10.0kb upstream 10.0kb upstream 11397 true scaffold_6: 25054668-25066064 Theobroma cacao
Thecc1EG029939 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25054668-25064667 Theobroma cacao
Thecc1EG029939 10.0kb downstream 10.0kb downstream 11397 true scaffold_6: 25064668-25076064 Theobroma cacao
Thecc1EG029939 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25066065-25076064 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834585 5264 Brassicales-Malvales View MSA
124343665 5266 SBM View MSA
124240186 5268 Malvidae View MSA
124065813 5270 Rosid View MSA
123751749 5271 Pentapetalae View MSA
122792036 5272 Eudicot View MSA
122045560 5273 Angiosperm View MSA
121350662 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain