Gene : Pavir.1NG336800 P. virgatum v4.1
Defline:  (1 of 2) K01653 - acetolactate synthase I/III small subunit (E2.2.1.6S, ilvH, ilvN) Genomic Order:  3052
Name:  ? Pavir.1NG336800 Secondary Identifier:  ? PAC:37613549
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BRANCHED-CHAIN-AA-SYN-PWY Panicum virgatum pathologic  
Pvirgatum ILEUSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum VALSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG336800 0.5kb upstream 0.5kb upstream 5842 true Chr01N: 72986918-72992759 Panicum virgatum
Pavir.1NG336800 0.5kb upstream 0.5kb upstream 500 false Chr01N: 72986918-72987417 Panicum virgatum
Pavir.1NG336800 0.5kb downstream 0.5kb downstream 5842 true Chr01N: 72987418-72993259 Panicum virgatum
Pavir.1NG336800 0.5kb downstream 0.5kb downstream 500 false Chr01N: 72992760-72993259 Panicum virgatum
Pavir.1NG336800 1.0kb upstream 1.0kb upstream 6342 true Chr01N: 72986418-72992759 Panicum virgatum
Pavir.1NG336800 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 72986418-72987417 Panicum virgatum
Pavir.1NG336800 1.0kb downstream 1.0kb downstream 6342 true Chr01N: 72987418-72993759 Panicum virgatum
Pavir.1NG336800 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 72992760-72993759 Panicum virgatum
Pavir.1NG336800 2.0kb upstream 2.0kb upstream 7342 true Chr01N: 72985418-72992759 Panicum virgatum
Pavir.1NG336800 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 72985418-72987417 Panicum virgatum
Pavir.1NG336800 2.0kb downstream 2.0kb downstream 7342 true Chr01N: 72987418-72994759 Panicum virgatum
Pavir.1NG336800 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 72992760-72994759 Panicum virgatum
Pavir.1NG336800 5.0kb upstream 5.0kb upstream 10342 true Chr01N: 72982418-72992759 Panicum virgatum
Pavir.1NG336800 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 72982418-72987417 Panicum virgatum
Pavir.1NG336800 5.0kb downstream 5.0kb downstream 10342 true Chr01N: 72987418-72997759 Panicum virgatum
Pavir.1NG336800 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 72992760-72997759 Panicum virgatum
Pavir.1NG336800 10.0kb upstream 10.0kb upstream 15342 true Chr01N: 72977418-72992759 Panicum virgatum
Pavir.1NG336800 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 72977418-72987417 Panicum virgatum
Pavir.1NG336800 10.0kb downstream 10.0kb downstream 15342 true Chr01N: 72987418-73002759 Panicum virgatum
Pavir.1NG336800 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 72992760-73002759 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122178591 5267 Panicoideae View MSA
124576273 5269 Grass View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain