Gene : Thecc1EG029891 T. cacao v1.1
Defline:  (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) Genomic Order:  1849
Name:  ? Thecc1EG029891 Secondary Identifier:  ? PAC:27440608
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029891 0.5kb upstream 0.5kb upstream 5682 true scaffold_6: 24797443-24803124 Theobroma cacao
Thecc1EG029891 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24802625-24803124 Theobroma cacao
Thecc1EG029891 0.5kb downstream 0.5kb downstream 5682 true scaffold_6: 24796943-24802624 Theobroma cacao
Thecc1EG029891 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24796943-24797442 Theobroma cacao
Thecc1EG029891 1.0kb upstream 1.0kb upstream 6182 true scaffold_6: 24797443-24803624 Theobroma cacao
Thecc1EG029891 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24802625-24803624 Theobroma cacao
Thecc1EG029891 1.0kb downstream 1.0kb downstream 6182 true scaffold_6: 24796443-24802624 Theobroma cacao
Thecc1EG029891 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24796443-24797442 Theobroma cacao
Thecc1EG029891 2.0kb upstream 2.0kb upstream 7182 true scaffold_6: 24797443-24804624 Theobroma cacao
Thecc1EG029891 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24802625-24804624 Theobroma cacao
Thecc1EG029891 2.0kb downstream 2.0kb downstream 7182 true scaffold_6: 24795443-24802624 Theobroma cacao
Thecc1EG029891 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24795443-24797442 Theobroma cacao
Thecc1EG029891 5.0kb upstream 5.0kb upstream 10182 true scaffold_6: 24797443-24807624 Theobroma cacao
Thecc1EG029891 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24802625-24807624 Theobroma cacao
Thecc1EG029891 5.0kb downstream 5.0kb downstream 10182 true scaffold_6: 24792443-24802624 Theobroma cacao
Thecc1EG029891 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24792443-24797442 Theobroma cacao
Thecc1EG029891 10.0kb upstream 10.0kb upstream 15182 true scaffold_6: 24797443-24812624 Theobroma cacao
Thecc1EG029891 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24802625-24812624 Theobroma cacao
Thecc1EG029891 10.0kb downstream 10.0kb downstream 15182 true scaffold_6: 24787443-24802624 Theobroma cacao
Thecc1EG029891 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24787443-24797442 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827649 5264 Brassicales-Malvales View MSA
124340405 5266 SBM View MSA
124239742 5268 Malvidae View MSA
124073530 5270 Rosid View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain