Gene : Pavir.1NG400600 P. virgatum v4.1
Defline:  (1 of 2) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  4158
Name:  ? Pavir.1NG400600 Secondary Identifier:  ? PAC:37609865
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG400600 0.5kb upstream 0.5kb upstream 7734 true Chr01N: 86795794-86803527 Panicum virgatum
Pavir.1NG400600 0.5kb upstream 0.5kb upstream 500 false Chr01N: 86803028-86803527 Panicum virgatum
Pavir.1NG400600 0.5kb downstream 0.5kb downstream 7734 true Chr01N: 86795294-86803027 Panicum virgatum
Pavir.1NG400600 0.5kb downstream 0.5kb downstream 500 false Chr01N: 86795294-86795793 Panicum virgatum
Pavir.1NG400600 1.0kb upstream 1.0kb upstream 8234 true Chr01N: 86795794-86804027 Panicum virgatum
Pavir.1NG400600 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 86803028-86804027 Panicum virgatum
Pavir.1NG400600 1.0kb downstream 1.0kb downstream 8234 true Chr01N: 86794794-86803027 Panicum virgatum
Pavir.1NG400600 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 86794794-86795793 Panicum virgatum
Pavir.1NG400600 2.0kb upstream 2.0kb upstream 9234 true Chr01N: 86795794-86805027 Panicum virgatum
Pavir.1NG400600 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 86803028-86805027 Panicum virgatum
Pavir.1NG400600 2.0kb downstream 2.0kb downstream 9234 true Chr01N: 86793794-86803027 Panicum virgatum
Pavir.1NG400600 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 86793794-86795793 Panicum virgatum
Pavir.1NG400600 5.0kb upstream 5.0kb upstream 12234 true Chr01N: 86795794-86808027 Panicum virgatum
Pavir.1NG400600 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 86803028-86808027 Panicum virgatum
Pavir.1NG400600 5.0kb downstream 5.0kb downstream 12234 true Chr01N: 86790794-86803027 Panicum virgatum
Pavir.1NG400600 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 86790794-86795793 Panicum virgatum
Pavir.1NG400600 10.0kb upstream 10.0kb upstream 17234 true Chr01N: 86795794-86813027 Panicum virgatum
Pavir.1NG400600 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 86803028-86813027 Panicum virgatum
Pavir.1NG400600 10.0kb downstream 10.0kb downstream 17234 true Chr01N: 86785794-86803027 Panicum virgatum
Pavir.1NG400600 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 86785794-86795793 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122088347 5267 Panicoideae Singleton cluster - no MSA
124386089 5269 Grass Singleton cluster - no MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain