Gene : Thecc1EG030079 T. cacao v1.1
Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  2022
Name:  ? Thecc1EG030079 Secondary Identifier:  ? PAC:27439806
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030079 0.5kb upstream 0.5kb upstream 2309 true scaffold_6: 25717367-25719675 Theobroma cacao
Thecc1EG030079 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25719176-25719675 Theobroma cacao
Thecc1EG030079 0.5kb downstream 0.5kb downstream 2309 true scaffold_6: 25716867-25719175 Theobroma cacao
Thecc1EG030079 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25716867-25717366 Theobroma cacao
Thecc1EG030079 1.0kb upstream 1.0kb upstream 2809 true scaffold_6: 25717367-25720175 Theobroma cacao
Thecc1EG030079 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25719176-25720175 Theobroma cacao
Thecc1EG030079 1.0kb downstream 1.0kb downstream 2809 true scaffold_6: 25716367-25719175 Theobroma cacao
Thecc1EG030079 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25716367-25717366 Theobroma cacao
Thecc1EG030079 2.0kb upstream 2.0kb upstream 3809 true scaffold_6: 25717367-25721175 Theobroma cacao
Thecc1EG030079 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25719176-25721175 Theobroma cacao
Thecc1EG030079 2.0kb downstream 2.0kb downstream 3809 true scaffold_6: 25715367-25719175 Theobroma cacao
Thecc1EG030079 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25715367-25717366 Theobroma cacao
Thecc1EG030079 5.0kb upstream 5.0kb upstream 6809 true scaffold_6: 25717367-25724175 Theobroma cacao
Thecc1EG030079 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25719176-25724175 Theobroma cacao
Thecc1EG030079 5.0kb downstream 5.0kb downstream 6809 true scaffold_6: 25712367-25719175 Theobroma cacao
Thecc1EG030079 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25712367-25717366 Theobroma cacao
Thecc1EG030079 10.0kb upstream 10.0kb upstream 11809 true scaffold_6: 25717367-25729175 Theobroma cacao
Thecc1EG030079 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25719176-25729175 Theobroma cacao
Thecc1EG030079 10.0kb downstream 10.0kb downstream 11809 true scaffold_6: 25707367-25719175 Theobroma cacao
Thecc1EG030079 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25707367-25717366 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain