Gene : Pavir.1NG503300 P. virgatum v4.1
Defline:  (1 of 2) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  4694
Name:  ? Pavir.1NG503300 Secondary Identifier:  ? PAC:37614329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7213 Panicum virgatum pathologic  
Pvirgatum PWY-7214 Panicum virgatum pathologic  
Pvirgatum PWY-7445 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG503300 0.5kb upstream 0.5kb upstream 5438 true Chr01N: 93006408-93011845 Panicum virgatum
Pavir.1NG503300 0.5kb upstream 0.5kb upstream 500 false Chr01N: 93006408-93006907 Panicum virgatum
Pavir.1NG503300 0.5kb downstream 0.5kb downstream 5438 true Chr01N: 93006908-93012345 Panicum virgatum
Pavir.1NG503300 0.5kb downstream 0.5kb downstream 500 false Chr01N: 93011846-93012345 Panicum virgatum
Pavir.1NG503300 1.0kb upstream 1.0kb upstream 5938 true Chr01N: 93005908-93011845 Panicum virgatum
Pavir.1NG503300 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 93005908-93006907 Panicum virgatum
Pavir.1NG503300 1.0kb downstream 1.0kb downstream 5938 true Chr01N: 93006908-93012845 Panicum virgatum
Pavir.1NG503300 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 93011846-93012845 Panicum virgatum
Pavir.1NG503300 2.0kb upstream 2.0kb upstream 6938 true Chr01N: 93004908-93011845 Panicum virgatum
Pavir.1NG503300 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 93004908-93006907 Panicum virgatum
Pavir.1NG503300 2.0kb downstream 2.0kb downstream 6938 true Chr01N: 93006908-93013845 Panicum virgatum
Pavir.1NG503300 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 93011846-93013845 Panicum virgatum
Pavir.1NG503300 5.0kb upstream 5.0kb upstream 9938 true Chr01N: 93001908-93011845 Panicum virgatum
Pavir.1NG503300 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 93001908-93006907 Panicum virgatum
Pavir.1NG503300 5.0kb downstream 5.0kb downstream 9938 true Chr01N: 93006908-93016845 Panicum virgatum
Pavir.1NG503300 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 93011846-93016845 Panicum virgatum
Pavir.1NG503300 10.0kb upstream 10.0kb upstream 14938 true Chr01N: 92996908-93011845 Panicum virgatum
Pavir.1NG503300 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 92996908-93006907 Panicum virgatum
Pavir.1NG503300 10.0kb downstream 10.0kb downstream 14938 true Chr01N: 93006908-93021845 Panicum virgatum
Pavir.1NG503300 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 93011846-93021845 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178103 5267 Panicoideae View MSA
124579874 5269 Grass View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain