Gene : Thecc1EG030339 T. cacao v1.1
Defline:  (1 of 1) PTHR10655//PTHR10655:SF20 - LYSOPHOSPHOLIPASE-RELATED // CARBOXYLESTERASE Genomic Order:  2240
Name:  ? Thecc1EG030339 Secondary Identifier:  ? PAC:27439763
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7409 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030339 0.5kb upstream 0.5kb upstream 4407 true scaffold_6: 26724569-26728975 Theobroma cacao
Thecc1EG030339 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26728476-26728975 Theobroma cacao
Thecc1EG030339 0.5kb downstream 0.5kb downstream 4407 true scaffold_6: 26724069-26728475 Theobroma cacao
Thecc1EG030339 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26724069-26724568 Theobroma cacao
Thecc1EG030339 1.0kb upstream 1.0kb upstream 4907 true scaffold_6: 26724569-26729475 Theobroma cacao
Thecc1EG030339 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26728476-26729475 Theobroma cacao
Thecc1EG030339 1.0kb downstream 1.0kb downstream 4907 true scaffold_6: 26723569-26728475 Theobroma cacao
Thecc1EG030339 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26723569-26724568 Theobroma cacao
Thecc1EG030339 2.0kb upstream 2.0kb upstream 5907 true scaffold_6: 26724569-26730475 Theobroma cacao
Thecc1EG030339 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26728476-26730475 Theobroma cacao
Thecc1EG030339 2.0kb downstream 2.0kb downstream 5907 true scaffold_6: 26722569-26728475 Theobroma cacao
Thecc1EG030339 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26722569-26724568 Theobroma cacao
Thecc1EG030339 5.0kb upstream 5.0kb upstream 8907 true scaffold_6: 26724569-26733475 Theobroma cacao
Thecc1EG030339 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26728476-26733475 Theobroma cacao
Thecc1EG030339 5.0kb downstream 5.0kb downstream 8907 true scaffold_6: 26719569-26728475 Theobroma cacao
Thecc1EG030339 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26719569-26724568 Theobroma cacao
Thecc1EG030339 10.0kb upstream 10.0kb upstream 13907 true scaffold_6: 26724569-26738475 Theobroma cacao
Thecc1EG030339 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26728476-26738475 Theobroma cacao
Thecc1EG030339 10.0kb downstream 10.0kb downstream 13907 true scaffold_6: 26714569-26728475 Theobroma cacao
Thecc1EG030339 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26714569-26724568 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831256 5264 Brassicales-Malvales View MSA
124346497 5266 SBM View MSA
124241840 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain