Gene : Thecc1EG030323 T. cacao v1.1
Defline:  (1 of 3) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Genomic Order:  2225
Name:  ? Thecc1EG030323 Secondary Identifier:  ? PAC:27440216
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030323 0.5kb upstream 0.5kb upstream 7913 true scaffold_6: 26663284-26671196 Theobroma cacao
Thecc1EG030323 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26670697-26671196 Theobroma cacao
Thecc1EG030323 0.5kb downstream 0.5kb downstream 7913 true scaffold_6: 26662784-26670696 Theobroma cacao
Thecc1EG030323 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26662784-26663283 Theobroma cacao
Thecc1EG030323 1.0kb upstream 1.0kb upstream 8413 true scaffold_6: 26663284-26671696 Theobroma cacao
Thecc1EG030323 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26670697-26671696 Theobroma cacao
Thecc1EG030323 1.0kb downstream 1.0kb downstream 8413 true scaffold_6: 26662284-26670696 Theobroma cacao
Thecc1EG030323 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26662284-26663283 Theobroma cacao
Thecc1EG030323 2.0kb upstream 2.0kb upstream 9413 true scaffold_6: 26663284-26672696 Theobroma cacao
Thecc1EG030323 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26670697-26672696 Theobroma cacao
Thecc1EG030323 2.0kb downstream 2.0kb downstream 9413 true scaffold_6: 26661284-26670696 Theobroma cacao
Thecc1EG030323 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26661284-26663283 Theobroma cacao
Thecc1EG030323 5.0kb upstream 5.0kb upstream 12413 true scaffold_6: 26663284-26675696 Theobroma cacao
Thecc1EG030323 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26670697-26675696 Theobroma cacao
Thecc1EG030323 5.0kb downstream 5.0kb downstream 12413 true scaffold_6: 26658284-26670696 Theobroma cacao
Thecc1EG030323 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26658284-26663283 Theobroma cacao
Thecc1EG030323 10.0kb upstream 10.0kb upstream 17413 true scaffold_6: 26663284-26680696 Theobroma cacao
Thecc1EG030323 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26670697-26680696 Theobroma cacao
Thecc1EG030323 10.0kb downstream 10.0kb downstream 17413 true scaffold_6: 26653284-26670696 Theobroma cacao
Thecc1EG030323 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26653284-26663283 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824552 5264 Brassicales-Malvales View MSA
124320227 5266 SBM View MSA
124248225 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain