Gene : Thecc1EG030417 T. cacao v1.1

Defline:  (1 of 1) PTHR11003//PTHR11003:SF121 - POTASSIUM CHANNEL, SUBFAMILY K // SUBFAMILY NOT NAMED Genomic Order:  2304
Name:  ? Thecc1EG030417 Secondary Identifier:  ? PAC:27439191

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030417 0.5kb upstream 0.5kb upstream 2317 true scaffold_6: 26963892-26966208 Theobroma cacao
Thecc1EG030417 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26963892-26964391 Theobroma cacao
Thecc1EG030417 0.5kb downstream 0.5kb downstream 2317 true scaffold_6: 26964392-26966708 Theobroma cacao
Thecc1EG030417 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26966209-26966708 Theobroma cacao
Thecc1EG030417 1.0kb upstream 1.0kb upstream 2817 true scaffold_6: 26963392-26966208 Theobroma cacao
Thecc1EG030417 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26963392-26964391 Theobroma cacao
Thecc1EG030417 1.0kb downstream 1.0kb downstream 2817 true scaffold_6: 26964392-26967208 Theobroma cacao
Thecc1EG030417 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26966209-26967208 Theobroma cacao
Thecc1EG030417 2.0kb upstream 2.0kb upstream 3817 true scaffold_6: 26962392-26966208 Theobroma cacao
Thecc1EG030417 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26962392-26964391 Theobroma cacao
Thecc1EG030417 2.0kb downstream 2.0kb downstream 3817 true scaffold_6: 26964392-26968208 Theobroma cacao
Thecc1EG030417 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26966209-26968208 Theobroma cacao
Thecc1EG030417 5.0kb upstream 5.0kb upstream 6817 true scaffold_6: 26959392-26966208 Theobroma cacao
Thecc1EG030417 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26959392-26964391 Theobroma cacao
Thecc1EG030417 5.0kb downstream 5.0kb downstream 6817 true scaffold_6: 26964392-26971208 Theobroma cacao
Thecc1EG030417 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26966209-26971208 Theobroma cacao
Thecc1EG030417 10.0kb upstream 10.0kb upstream 11817 true scaffold_6: 26954392-26966208 Theobroma cacao
Thecc1EG030417 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26954392-26964391 Theobroma cacao
Thecc1EG030417 10.0kb downstream 10.0kb downstream 11817 true scaffold_6: 26964392-26976208 Theobroma cacao
Thecc1EG030417 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26966209-26976208 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826173 5264 Brassicales-Malvales View MSA
124351598 5266 SBM View MSA
124248548 5268 Malvidae View MSA
124070017 5270 Rosid View MSA
123748473 5271 Pentapetalae View MSA
122795341 5272 Eudicot View MSA
122044893 5273 Angiosperm View MSA
121351714 5274 Embryophyte View MSA
123382287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain