Gene : Thecc1EG030398 T. cacao v1.1
Defline:  (1 of 2) PTHR32227:SF60 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  2290
Name:  ? Thecc1EG030398 Secondary Identifier:  ? PAC:27438789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030398 0.5kb upstream 0.5kb upstream 1861 true scaffold_6: 26913537-26915397 Theobroma cacao
Thecc1EG030398 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26913537-26914036 Theobroma cacao
Thecc1EG030398 0.5kb downstream 0.5kb downstream 1861 true scaffold_6: 26914037-26915897 Theobroma cacao
Thecc1EG030398 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26915398-26915897 Theobroma cacao
Thecc1EG030398 1.0kb upstream 1.0kb upstream 2361 true scaffold_6: 26913037-26915397 Theobroma cacao
Thecc1EG030398 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26913037-26914036 Theobroma cacao
Thecc1EG030398 1.0kb downstream 1.0kb downstream 2361 true scaffold_6: 26914037-26916397 Theobroma cacao
Thecc1EG030398 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26915398-26916397 Theobroma cacao
Thecc1EG030398 2.0kb upstream 2.0kb upstream 3361 true scaffold_6: 26912037-26915397 Theobroma cacao
Thecc1EG030398 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26912037-26914036 Theobroma cacao
Thecc1EG030398 2.0kb downstream 2.0kb downstream 3361 true scaffold_6: 26914037-26917397 Theobroma cacao
Thecc1EG030398 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26915398-26917397 Theobroma cacao
Thecc1EG030398 5.0kb upstream 5.0kb upstream 6361 true scaffold_6: 26909037-26915397 Theobroma cacao
Thecc1EG030398 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26909037-26914036 Theobroma cacao
Thecc1EG030398 5.0kb downstream 5.0kb downstream 6361 true scaffold_6: 26914037-26920397 Theobroma cacao
Thecc1EG030398 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26915398-26920397 Theobroma cacao
Thecc1EG030398 10.0kb upstream 10.0kb upstream 11361 true scaffold_6: 26904037-26915397 Theobroma cacao
Thecc1EG030398 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26904037-26914036 Theobroma cacao
Thecc1EG030398 10.0kb downstream 10.0kb downstream 11361 true scaffold_6: 26914037-26925397 Theobroma cacao
Thecc1EG030398 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26915398-26925397 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826231 5264 Brassicales-Malvales View MSA
124347353 5266 SBM View MSA
124245445 5268 Malvidae View MSA
124064522 5270 Rosid View MSA
123739616 5271 Pentapetalae View MSA
122788531 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain