Gene : Thecc1EG030500 T. cacao v1.1
Defline:  (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) Genomic Order:  4
Name:  ? Thecc1EG030500 Secondary Identifier:  ? PAC:27444754
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030500 0.5kb upstream 0.5kb upstream 4628 true scaffold_7: 28924-33551 Theobroma cacao
Thecc1EG030500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33052-33551 Theobroma cacao
Thecc1EG030500 0.5kb downstream 0.5kb downstream 4628 true scaffold_7: 28424-33051 Theobroma cacao
Thecc1EG030500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28424-28923 Theobroma cacao
Thecc1EG030500 1.0kb upstream 1.0kb upstream 5128 true scaffold_7: 28924-34051 Theobroma cacao
Thecc1EG030500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33052-34051 Theobroma cacao
Thecc1EG030500 1.0kb downstream 1.0kb downstream 5128 true scaffold_7: 27924-33051 Theobroma cacao
Thecc1EG030500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27924-28923 Theobroma cacao
Thecc1EG030500 2.0kb upstream 2.0kb upstream 6128 true scaffold_7: 28924-35051 Theobroma cacao
Thecc1EG030500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33052-35051 Theobroma cacao
Thecc1EG030500 2.0kb downstream 2.0kb downstream 6128 true scaffold_7: 26924-33051 Theobroma cacao
Thecc1EG030500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26924-28923 Theobroma cacao
Thecc1EG030500 5.0kb upstream 5.0kb upstream 9128 true scaffold_7: 28924-38051 Theobroma cacao
Thecc1EG030500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33052-38051 Theobroma cacao
Thecc1EG030500 5.0kb downstream 5.0kb downstream 9128 true scaffold_7: 23924-33051 Theobroma cacao
Thecc1EG030500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23924-28923 Theobroma cacao
Thecc1EG030500 10.0kb upstream 10.0kb upstream 14128 true scaffold_7: 28924-43051 Theobroma cacao
Thecc1EG030500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33052-43051 Theobroma cacao
Thecc1EG030500 10.0kb downstream 10.0kb downstream 14128 true scaffold_7: 18924-33051 Theobroma cacao
Thecc1EG030500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 18924-28923 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827641 5264 Brassicales-Malvales View MSA
124337846 5266 SBM View MSA
124237434 5268 Malvidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain