Gene : Thecc1EG031297 T. cacao v1.1

Defline:  (1 of 12) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  650
Name:  ? Thecc1EG031297 Secondary Identifier:  ? PAC:27444997

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031297 0.5kb upstream 0.5kb upstream 4622 true scaffold_7: 4094854-4099475 Theobroma cacao
Thecc1EG031297 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4094854-4095353 Theobroma cacao
Thecc1EG031297 0.5kb downstream 0.5kb downstream 4622 true scaffold_7: 4095354-4099975 Theobroma cacao
Thecc1EG031297 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4099476-4099975 Theobroma cacao
Thecc1EG031297 1.0kb upstream 1.0kb upstream 5122 true scaffold_7: 4094354-4099475 Theobroma cacao
Thecc1EG031297 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4094354-4095353 Theobroma cacao
Thecc1EG031297 1.0kb downstream 1.0kb downstream 5122 true scaffold_7: 4095354-4100475 Theobroma cacao
Thecc1EG031297 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4099476-4100475 Theobroma cacao
Thecc1EG031297 2.0kb upstream 2.0kb upstream 6122 true scaffold_7: 4093354-4099475 Theobroma cacao
Thecc1EG031297 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4093354-4095353 Theobroma cacao
Thecc1EG031297 2.0kb downstream 2.0kb downstream 6122 true scaffold_7: 4095354-4101475 Theobroma cacao
Thecc1EG031297 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4099476-4101475 Theobroma cacao
Thecc1EG031297 5.0kb upstream 5.0kb upstream 9122 true scaffold_7: 4090354-4099475 Theobroma cacao
Thecc1EG031297 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4090354-4095353 Theobroma cacao
Thecc1EG031297 5.0kb downstream 5.0kb downstream 9122 true scaffold_7: 4095354-4104475 Theobroma cacao
Thecc1EG031297 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4099476-4104475 Theobroma cacao
Thecc1EG031297 10.0kb upstream 10.0kb upstream 14122 true scaffold_7: 4085354-4099475 Theobroma cacao
Thecc1EG031297 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4085354-4095353 Theobroma cacao
Thecc1EG031297 10.0kb downstream 10.0kb downstream 14122 true scaffold_7: 4095354-4109475 Theobroma cacao
Thecc1EG031297 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4099476-4109475 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836884 5264 Brassicales-Malvales View MSA
124322219 5266 SBM View MSA
124169105 5268 Malvidae View MSA
124074483 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain