Gene : Pavir.3NG284600 P. virgatum v4.1
Defline:  (1 of 11) PF06943 - LSD1 zinc finger (zf-LSD1) Genomic Order:  2696
Name:  ? Pavir.3NG284600 Secondary Identifier:  ? PAC:37641740
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG284600 0.5kb upstream 0.5kb upstream 4959 true Chr03N: 52203544-52208502 Panicum virgatum
Pavir.3NG284600 0.5kb upstream 0.5kb upstream 500 false Chr03N: 52208003-52208502 Panicum virgatum
Pavir.3NG284600 0.5kb downstream 0.5kb downstream 4959 true Chr03N: 52203044-52208002 Panicum virgatum
Pavir.3NG284600 0.5kb downstream 0.5kb downstream 500 false Chr03N: 52203044-52203543 Panicum virgatum
Pavir.3NG284600 1.0kb upstream 1.0kb upstream 5459 true Chr03N: 52203544-52209002 Panicum virgatum
Pavir.3NG284600 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 52208003-52209002 Panicum virgatum
Pavir.3NG284600 1.0kb downstream 1.0kb downstream 5459 true Chr03N: 52202544-52208002 Panicum virgatum
Pavir.3NG284600 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 52202544-52203543 Panicum virgatum
Pavir.3NG284600 2.0kb upstream 2.0kb upstream 6459 true Chr03N: 52203544-52210002 Panicum virgatum
Pavir.3NG284600 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 52208003-52210002 Panicum virgatum
Pavir.3NG284600 2.0kb downstream 2.0kb downstream 6459 true Chr03N: 52201544-52208002 Panicum virgatum
Pavir.3NG284600 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 52201544-52203543 Panicum virgatum
Pavir.3NG284600 5.0kb upstream 5.0kb upstream 9459 true Chr03N: 52203544-52213002 Panicum virgatum
Pavir.3NG284600 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 52208003-52213002 Panicum virgatum
Pavir.3NG284600 5.0kb downstream 5.0kb downstream 9459 true Chr03N: 52198544-52208002 Panicum virgatum
Pavir.3NG284600 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 52198544-52203543 Panicum virgatum
Pavir.3NG284600 10.0kb upstream 10.0kb upstream 14459 true Chr03N: 52203544-52218002 Panicum virgatum
Pavir.3NG284600 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 52208003-52218002 Panicum virgatum
Pavir.3NG284600 10.0kb downstream 10.0kb downstream 14459 true Chr03N: 52193544-52208002 Panicum virgatum
Pavir.3NG284600 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 52193544-52203543 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184583 5267 Panicoideae View MSA
124585557 5269 Grass View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain