Protein Family : LSD1 zinc finger domain containing protein, expressed 124585557

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  27

27 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_5AS_B310AA218 (1 of 19) PF06943 - LSD1 zinc finger (zf-LSD1) T. aestivum v2.2 3551   ta_iwgsc_5as_v1_1513074: 1-3551
Traes_5BS_4179BB1C5 (1 of 19) PF06943 - LSD1 zinc finger (zf-LSD1) T. aestivum v2.2 3902   ta_iwgsc_5bs_v1_2244429: 6055-9956
Seita.3G386400 (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) S. italica v2.2 4016   scaffold_3: 48762140-48766155
Seita.9G159900 (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) S. italica v2.2 3091   scaffold_9: 10606937-10610027
Bradi4g02040 (1 of 8) PF06943 - LSD1 zinc finger (zf-LSD1) B. distachyon v3.1 4172   Bd4: 1335496-1339667
LOC_Os12g41700 (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) O. sativa v7.0 3598   Chr12: 25815277-25818874
LOC_Os03g43840 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 O. sativa v7.0 4995   Chr3: 24574307-24579301
Zm00008a012248 (1 of 6) PF06943 - LSD1 zinc finger (zf-LSD1) Z. mays PH207 v1.1 3477   chr03: 122983128-122986604
Pavir.9KG075900 (1 of 11) PF06943 - LSD1 zinc finger (zf-LSD1) P. virgatum v4.1 3236   Chr09K: 7055800-7059035
Pavir.9NG189700 (1 of 11) PF06943 - LSD1 zinc finger (zf-LSD1) P. virgatum v4.1 3240   Chr09N: 19025313-19028552
Pavir.3NG284600 (1 of 11) PF06943 - LSD1 zinc finger (zf-LSD1) P. virgatum v4.1 4459   Chr03N: 52203544-52208002
Sobic.001G158500 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 S. bicolor v3.1.1 3964   Chr01: 12849913-12853876
HORVU5Hr1G011690 (1 of 10) PF06943 - LSD1 zinc finger (zf-LSD1) H. vulgare r1 3841   chr5H: 31295931-31299771
Zm00001d033262 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 Z. mays RefGen_V4 4003   1: 256420827-256424829
Pahal.3G494400 (1 of 5) PF06943 - LSD1 zinc finger (zf-LSD1) P. hallii v3.1 3930   Chr03: 62531733-62535662
Pahal.9G157300 (1 of 5) PF06943 - LSD1 zinc finger (zf-LSD1) P. hallii v3.1 3301   Chr09: 9719300-9722600
PhHAL.3G469400 (1 of 6) PF06943 - LSD1 zinc finger (zf-LSD1) P. hallii HAL v2.1 3801   Chr03: 56515252-56519052
PhHAL.9G152200 (1 of 6) PF06943 - LSD1 zinc finger (zf-LSD1) P. hallii HAL v2.1 3433   Chr09: 9302079-9305511
Misin15G175300 (1 of 14) PF06943 - LSD1 zinc finger (zf-LSD1) M. sinensis v7.1 4186   Chr15: 64320628-64324813
Misin01G139800 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 M. sinensis v7.1 4204   Chr01: 26625050-26629253
Misin02G135100 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 M. sinensis v7.1 3888   Chr02: 26370872-26374759
Misin14G160300 (1 of 14) PF06943 - LSD1 zinc finger (zf-LSD1) M. sinensis v7.1 4026   Chr14: 57724554-57728579
OsKitaake12g208200 (1 of 10) PF06943 - LSD1 zinc finger (zf-LSD1) O. sativa Kitaake v3.1 3597   Chr12: 25396579-25400175
OsKitaake03g267100 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 O. sativa Kitaake v3.1 4995   Chr3: 25265770-25270764
Sevir.9G158300 (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) S. viridis v2.1 3270   Chr_09: 10393715-10396984
Sevir.3G402500 (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) S. viridis v2.1 4186   Chr_03: 48259575-48263760
Brast10G019500 (1 of 9) PF06943 - LSD1 zinc finger (zf-LSD1) B. stacei v1.1 4241   Chr10: 1178604-1182844

27 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_5AS_B310AA218.1 T. aestivum v2.2 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Traes_5BS_4179BB1C5.1 T. aestivum v2.2 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Seita.9G159900.1.p S. italica v2.2 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Seita.3G386400.1.p S. italica v2.2 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Bradi4g02040.1.p B. distachyon v3.1 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass
Brast10G019500.1.p B. stacei v1.1 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass
LOC_Os03g43840.1 O. sativa v7.0 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
LOC_Os12g41700.1 O. sativa v7.0 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Zm00008a012248_P01 Z. mays PH207 v1.1 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass
Pavir.3NG284600.1.p P. virgatum v4.1 124585557 LSD1 zinc finger domain containing protein, expressed 3 5269 Grass
Pavir.9NG189700.1.p P. virgatum v4.1 124585557 LSD1 zinc finger domain containing protein, expressed 3 5269 Grass
Pavir.9KG075900.1.p P. virgatum v4.1 124585557 LSD1 zinc finger domain containing protein, expressed 3 5269 Grass
HORVU5Hr1G011690.2 H. vulgare r1 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass
Pahal.3G494400.1.p P. hallii v3.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Pahal.9G157300.1.p P. hallii v3.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
PhHAL.9G152200.1.p P. hallii HAL v2.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
PhHAL.3G469400.1.p P. hallii HAL v2.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Misin01G139800.1.p M. sinensis v7.1 124585557 LSD1 zinc finger domain containing protein, expressed 4 5269 Grass
Misin02G135100.1.p M. sinensis v7.1 124585557 LSD1 zinc finger domain containing protein, expressed 4 5269 Grass
Misin14G160300.1.p M. sinensis v7.1 124585557 LSD1 zinc finger domain containing protein, expressed 4 5269 Grass
Misin15G175300.1.p M. sinensis v7.1 124585557 LSD1 zinc finger domain containing protein, expressed 4 5269 Grass
OsKitaake03g267100.1.p O. sativa Kitaake v3.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
OsKitaake12g208200.1.p O. sativa Kitaake v3.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Sevir.9G158300.1.p S. viridis v2.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Sevir.3G402500.1.p S. viridis v2.1 124585557 LSD1 zinc finger domain containing protein, expressed 2 5269 Grass
Sobic.001G158500.1.p S. bicolor v3.1.1 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass
Zm00001d033262_P001 Z. mays RefGen_V4 124585557 LSD1 zinc finger domain containing protein, expressed 1 5269 Grass