Gene : Sevir.3G402500 S. viridis v2.1
Defline:  (1 of 7) PF06943 - LSD1 zinc finger (zf-LSD1) Genomic Order:  4331
Name:  ? Sevir.3G402500 Secondary Identifier:  ? PAC:40649065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G402500 0.5kb upstream 0.5kb upstream 4686 true Chr_03: 48259575-48264260 Setaria viridis
Sevir.3G402500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 48263761-48264260 Setaria viridis
Sevir.3G402500 0.5kb downstream 0.5kb downstream 4686 true Chr_03: 48259075-48263760 Setaria viridis
Sevir.3G402500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 48259075-48259574 Setaria viridis
Sevir.3G402500 1.0kb upstream 1.0kb upstream 5186 true Chr_03: 48259575-48264760 Setaria viridis
Sevir.3G402500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 48263761-48264760 Setaria viridis
Sevir.3G402500 1.0kb downstream 1.0kb downstream 5186 true Chr_03: 48258575-48263760 Setaria viridis
Sevir.3G402500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 48258575-48259574 Setaria viridis
Sevir.3G402500 2.0kb upstream 2.0kb upstream 6186 true Chr_03: 48259575-48265760 Setaria viridis
Sevir.3G402500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 48263761-48265760 Setaria viridis
Sevir.3G402500 2.0kb downstream 2.0kb downstream 6186 true Chr_03: 48257575-48263760 Setaria viridis
Sevir.3G402500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 48257575-48259574 Setaria viridis
Sevir.3G402500 5.0kb upstream 5.0kb upstream 9186 true Chr_03: 48259575-48268760 Setaria viridis
Sevir.3G402500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 48263761-48268760 Setaria viridis
Sevir.3G402500 5.0kb downstream 5.0kb downstream 9186 true Chr_03: 48254575-48263760 Setaria viridis
Sevir.3G402500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 48254575-48259574 Setaria viridis
Sevir.3G402500 10.0kb upstream 10.0kb upstream 14186 true Chr_03: 48259575-48273760 Setaria viridis
Sevir.3G402500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 48263761-48273760 Setaria viridis
Sevir.3G402500 10.0kb downstream 10.0kb downstream 14186 true Chr_03: 48249575-48263760 Setaria viridis
Sevir.3G402500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 48249575-48259574 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184583 5267 Panicoideae View MSA
124585557 5269 Grass View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain