Gene : Pavir.3NG270600 P. virgatum v4.1
Defline:  (1 of 6) K02291 - phytoene synthase (crtB) Genomic Order:  2826
Name:  ? Pavir.3NG270600 Secondary Identifier:  ? PAC:37640780
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CAROTENOID-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6475 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG270600 0.5kb upstream 0.5kb upstream 5136 true Chr03N: 53361955-53367090 Panicum virgatum
Pavir.3NG270600 0.5kb upstream 0.5kb upstream 500 false Chr03N: 53361955-53362454 Panicum virgatum
Pavir.3NG270600 0.5kb downstream 0.5kb downstream 5136 true Chr03N: 53362455-53367590 Panicum virgatum
Pavir.3NG270600 0.5kb downstream 0.5kb downstream 500 false Chr03N: 53367091-53367590 Panicum virgatum
Pavir.3NG270600 1.0kb upstream 1.0kb upstream 5636 true Chr03N: 53361455-53367090 Panicum virgatum
Pavir.3NG270600 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 53361455-53362454 Panicum virgatum
Pavir.3NG270600 1.0kb downstream 1.0kb downstream 5636 true Chr03N: 53362455-53368090 Panicum virgatum
Pavir.3NG270600 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 53367091-53368090 Panicum virgatum
Pavir.3NG270600 2.0kb upstream 2.0kb upstream 6636 true Chr03N: 53360455-53367090 Panicum virgatum
Pavir.3NG270600 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 53360455-53362454 Panicum virgatum
Pavir.3NG270600 2.0kb downstream 2.0kb downstream 6636 true Chr03N: 53362455-53369090 Panicum virgatum
Pavir.3NG270600 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 53367091-53369090 Panicum virgatum
Pavir.3NG270600 5.0kb upstream 5.0kb upstream 9636 true Chr03N: 53357455-53367090 Panicum virgatum
Pavir.3NG270600 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 53357455-53362454 Panicum virgatum
Pavir.3NG270600 5.0kb downstream 5.0kb downstream 9636 true Chr03N: 53362455-53372090 Panicum virgatum
Pavir.3NG270600 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 53367091-53372090 Panicum virgatum
Pavir.3NG270600 10.0kb upstream 10.0kb upstream 14636 true Chr03N: 53352455-53367090 Panicum virgatum
Pavir.3NG270600 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 53352455-53362454 Panicum virgatum
Pavir.3NG270600 10.0kb downstream 10.0kb downstream 14636 true Chr03N: 53362455-53377090 Panicum virgatum
Pavir.3NG270600 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 53367091-53377090 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122177505 5267 Panicoideae View MSA
124573872 5269 Grass View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain