Gene : Pavir.3NG249900 P. virgatum v4.1
Defline:  (1 of 8) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Genomic Order:  2285
Name:  ? Pavir.3NG249900 Secondary Identifier:  ? PAC:37640794
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG249900 0.5kb upstream 0.5kb upstream 2740 true Chr03N: 45729516-45732255 Panicum virgatum
Pavir.3NG249900 0.5kb upstream 0.5kb upstream 500 false Chr03N: 45729516-45730015 Panicum virgatum
Pavir.3NG249900 0.5kb downstream 0.5kb downstream 2740 true Chr03N: 45730016-45732755 Panicum virgatum
Pavir.3NG249900 0.5kb downstream 0.5kb downstream 500 false Chr03N: 45732256-45732755 Panicum virgatum
Pavir.3NG249900 1.0kb upstream 1.0kb upstream 3240 true Chr03N: 45729016-45732255 Panicum virgatum
Pavir.3NG249900 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 45729016-45730015 Panicum virgatum
Pavir.3NG249900 1.0kb downstream 1.0kb downstream 3240 true Chr03N: 45730016-45733255 Panicum virgatum
Pavir.3NG249900 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 45732256-45733255 Panicum virgatum
Pavir.3NG249900 2.0kb upstream 2.0kb upstream 4240 true Chr03N: 45728016-45732255 Panicum virgatum
Pavir.3NG249900 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 45728016-45730015 Panicum virgatum
Pavir.3NG249900 2.0kb downstream 2.0kb downstream 4240 true Chr03N: 45730016-45734255 Panicum virgatum
Pavir.3NG249900 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 45732256-45734255 Panicum virgatum
Pavir.3NG249900 5.0kb upstream 5.0kb upstream 7240 true Chr03N: 45725016-45732255 Panicum virgatum
Pavir.3NG249900 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 45725016-45730015 Panicum virgatum
Pavir.3NG249900 5.0kb downstream 5.0kb downstream 7240 true Chr03N: 45730016-45737255 Panicum virgatum
Pavir.3NG249900 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 45732256-45737255 Panicum virgatum
Pavir.3NG249900 10.0kb upstream 10.0kb upstream 12240 true Chr03N: 45720016-45732255 Panicum virgatum
Pavir.3NG249900 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 45720016-45730015 Panicum virgatum
Pavir.3NG249900 10.0kb downstream 10.0kb downstream 12240 true Chr03N: 45730016-45742255 Panicum virgatum
Pavir.3NG249900 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 45732256-45742255 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122096812 5267 Panicoideae Singleton cluster - no MSA
124393812 5269 Grass Singleton cluster - no MSA
122052144 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain