Gene : Thecc1EG031780 T. cacao v1.1
Defline:  (1 of 3) PTHR31104//PTHR31104:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K15M2 Genomic Order:  1029
Name:  ? Thecc1EG031780 Secondary Identifier:  ? PAC:27444863
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031780 0.5kb upstream 0.5kb upstream 3157 true scaffold_7: 6834536-6837692 Theobroma cacao
Thecc1EG031780 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6837193-6837692 Theobroma cacao
Thecc1EG031780 0.5kb downstream 0.5kb downstream 3157 true scaffold_7: 6834036-6837192 Theobroma cacao
Thecc1EG031780 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6834036-6834535 Theobroma cacao
Thecc1EG031780 1.0kb upstream 1.0kb upstream 3657 true scaffold_7: 6834536-6838192 Theobroma cacao
Thecc1EG031780 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6837193-6838192 Theobroma cacao
Thecc1EG031780 1.0kb downstream 1.0kb downstream 3657 true scaffold_7: 6833536-6837192 Theobroma cacao
Thecc1EG031780 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6833536-6834535 Theobroma cacao
Thecc1EG031780 2.0kb upstream 2.0kb upstream 4657 true scaffold_7: 6834536-6839192 Theobroma cacao
Thecc1EG031780 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6837193-6839192 Theobroma cacao
Thecc1EG031780 2.0kb downstream 2.0kb downstream 4657 true scaffold_7: 6832536-6837192 Theobroma cacao
Thecc1EG031780 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6832536-6834535 Theobroma cacao
Thecc1EG031780 5.0kb upstream 5.0kb upstream 7657 true scaffold_7: 6834536-6842192 Theobroma cacao
Thecc1EG031780 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6837193-6842192 Theobroma cacao
Thecc1EG031780 5.0kb downstream 5.0kb downstream 7657 true scaffold_7: 6829536-6837192 Theobroma cacao
Thecc1EG031780 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6829536-6834535 Theobroma cacao
Thecc1EG031780 10.0kb upstream 10.0kb upstream 12657 true scaffold_7: 6834536-6847192 Theobroma cacao
Thecc1EG031780 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6837193-6847192 Theobroma cacao
Thecc1EG031780 10.0kb downstream 10.0kb downstream 12657 true scaffold_7: 6824536-6837192 Theobroma cacao
Thecc1EG031780 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6824536-6834535 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839595 5264 Brassicales-Malvales View MSA
124345963 5266 SBM View MSA
124254669 5268 Malvidae View MSA
124072866 5270 Rosid View MSA
123749062 5271 Pentapetalae View MSA
122793704 5272 Eudicot View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain