Gene : Thecc1EG032256 T. cacao v1.1
Defline:  (1 of 2) PTHR10052//PTHR10052:SF9 - 60S RIBOSOMAL PROTEIN L18A // SUBFAMILY NOT NAMED Genomic Order:  1320
Name:  ? Thecc1EG032256 Secondary Identifier:  ? PAC:27446180
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032256 0.5kb upstream 0.5kb upstream 4375 true scaffold_7: 9663908-9668282 Theobroma cacao
Thecc1EG032256 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9667783-9668282 Theobroma cacao
Thecc1EG032256 0.5kb downstream 0.5kb downstream 4375 true scaffold_7: 9663408-9667782 Theobroma cacao
Thecc1EG032256 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9663408-9663907 Theobroma cacao
Thecc1EG032256 1.0kb upstream 1.0kb upstream 4875 true scaffold_7: 9663908-9668782 Theobroma cacao
Thecc1EG032256 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9667783-9668782 Theobroma cacao
Thecc1EG032256 1.0kb downstream 1.0kb downstream 4875 true scaffold_7: 9662908-9667782 Theobroma cacao
Thecc1EG032256 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9662908-9663907 Theobroma cacao
Thecc1EG032256 2.0kb upstream 2.0kb upstream 5875 true scaffold_7: 9663908-9669782 Theobroma cacao
Thecc1EG032256 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9667783-9669782 Theobroma cacao
Thecc1EG032256 2.0kb downstream 2.0kb downstream 5875 true scaffold_7: 9661908-9667782 Theobroma cacao
Thecc1EG032256 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9661908-9663907 Theobroma cacao
Thecc1EG032256 5.0kb upstream 5.0kb upstream 8875 true scaffold_7: 9663908-9672782 Theobroma cacao
Thecc1EG032256 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9667783-9672782 Theobroma cacao
Thecc1EG032256 5.0kb downstream 5.0kb downstream 8875 true scaffold_7: 9658908-9667782 Theobroma cacao
Thecc1EG032256 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9658908-9663907 Theobroma cacao
Thecc1EG032256 10.0kb upstream 10.0kb upstream 13875 true scaffold_7: 9663908-9677782 Theobroma cacao
Thecc1EG032256 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9667783-9677782 Theobroma cacao
Thecc1EG032256 10.0kb downstream 10.0kb downstream 13875 true scaffold_7: 9653908-9667782 Theobroma cacao
Thecc1EG032256 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9653908-9663907 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838223 5264 Brassicales-Malvales View MSA
124349045 5266 SBM View MSA
124249811 5268 Malvidae View MSA
124074454 5270 Rosid View MSA
123749667 5271 Pentapetalae View MSA
122791619 5272 Eudicot View MSA
122042118 5273 Angiosperm View MSA
121350772 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain