Gene : Pavir.4NG316700 P. virgatum v4.1
Defline:  (1 of 2) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Genomic Order:  2849
Name:  ? Pavir.4NG316700 Secondary Identifier:  ? PAC:37682717
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6829 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG316700 0.5kb upstream 0.5kb upstream 3659 true Chr04N: 53926825-53930483 Panicum virgatum
Pavir.4NG316700 0.5kb upstream 0.5kb upstream 500 false Chr04N: 53926825-53927324 Panicum virgatum
Pavir.4NG316700 0.5kb downstream 0.5kb downstream 3659 true Chr04N: 53927325-53930983 Panicum virgatum
Pavir.4NG316700 0.5kb downstream 0.5kb downstream 500 false Chr04N: 53930484-53930983 Panicum virgatum
Pavir.4NG316700 1.0kb upstream 1.0kb upstream 4159 true Chr04N: 53926325-53930483 Panicum virgatum
Pavir.4NG316700 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 53926325-53927324 Panicum virgatum
Pavir.4NG316700 1.0kb downstream 1.0kb downstream 4159 true Chr04N: 53927325-53931483 Panicum virgatum
Pavir.4NG316700 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 53930484-53931483 Panicum virgatum
Pavir.4NG316700 2.0kb upstream 2.0kb upstream 5159 true Chr04N: 53925325-53930483 Panicum virgatum
Pavir.4NG316700 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 53925325-53927324 Panicum virgatum
Pavir.4NG316700 2.0kb downstream 2.0kb downstream 5159 true Chr04N: 53927325-53932483 Panicum virgatum
Pavir.4NG316700 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 53930484-53932483 Panicum virgatum
Pavir.4NG316700 5.0kb upstream 5.0kb upstream 8159 true Chr04N: 53922325-53930483 Panicum virgatum
Pavir.4NG316700 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 53922325-53927324 Panicum virgatum
Pavir.4NG316700 5.0kb downstream 5.0kb downstream 8159 true Chr04N: 53927325-53935483 Panicum virgatum
Pavir.4NG316700 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 53930484-53935483 Panicum virgatum
Pavir.4NG316700 10.0kb upstream 10.0kb upstream 13159 true Chr04N: 53917325-53930483 Panicum virgatum
Pavir.4NG316700 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 53917325-53927324 Panicum virgatum
Pavir.4NG316700 10.0kb downstream 10.0kb downstream 13159 true Chr04N: 53927325-53940483 Panicum virgatum
Pavir.4NG316700 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 53930484-53940483 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184350 5267 Panicoideae View MSA
124575975 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain