Gene : Thecc1EG033480 T. cacao v1.1
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  1758
Name:  ? Thecc1EG033480 Secondary Identifier:  ? PAC:27445908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033480 0.5kb upstream 0.5kb upstream 8578 true scaffold_7: 22048082-22056659 Theobroma cacao
Thecc1EG033480 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22056160-22056659 Theobroma cacao
Thecc1EG033480 0.5kb downstream 0.5kb downstream 8578 true scaffold_7: 22047582-22056159 Theobroma cacao
Thecc1EG033480 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22047582-22048081 Theobroma cacao
Thecc1EG033480 1.0kb upstream 1.0kb upstream 9078 true scaffold_7: 22048082-22057159 Theobroma cacao
Thecc1EG033480 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22056160-22057159 Theobroma cacao
Thecc1EG033480 1.0kb downstream 1.0kb downstream 9078 true scaffold_7: 22047082-22056159 Theobroma cacao
Thecc1EG033480 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22047082-22048081 Theobroma cacao
Thecc1EG033480 2.0kb upstream 2.0kb upstream 10078 true scaffold_7: 22048082-22058159 Theobroma cacao
Thecc1EG033480 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22056160-22058159 Theobroma cacao
Thecc1EG033480 2.0kb downstream 2.0kb downstream 10078 true scaffold_7: 22046082-22056159 Theobroma cacao
Thecc1EG033480 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22046082-22048081 Theobroma cacao
Thecc1EG033480 5.0kb upstream 5.0kb upstream 13078 true scaffold_7: 22048082-22061159 Theobroma cacao
Thecc1EG033480 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22056160-22061159 Theobroma cacao
Thecc1EG033480 5.0kb downstream 5.0kb downstream 13078 true scaffold_7: 22043082-22056159 Theobroma cacao
Thecc1EG033480 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22043082-22048081 Theobroma cacao
Thecc1EG033480 10.0kb upstream 10.0kb upstream 18078 true scaffold_7: 22048082-22066159 Theobroma cacao
Thecc1EG033480 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22056160-22066159 Theobroma cacao
Thecc1EG033480 10.0kb downstream 10.0kb downstream 18078 true scaffold_7: 22038082-22056159 Theobroma cacao
Thecc1EG033480 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22038082-22048081 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
123828343 5264 Brassicales-Malvales View MSA
124343592 5266 SBM View MSA
124254439 5268 Malvidae View MSA
124063364 5270 Rosid View MSA
123738114 5271 Pentapetalae View MSA
122789993 5272 Eudicot View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain