Gene : Thecc1EG033453 T. cacao v1.1

Defline:  (1 of 4) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE Genomic Order:  1744
Name:  ? Thecc1EG033453 Secondary Identifier:  ? PAC:27444696

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033453 0.5kb upstream 0.5kb upstream 9579 true scaffold_7: 21845729-21855307 Theobroma cacao
Thecc1EG033453 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 21845729-21846228 Theobroma cacao
Thecc1EG033453 0.5kb downstream 0.5kb downstream 9579 true scaffold_7: 21846229-21855807 Theobroma cacao
Thecc1EG033453 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 21855308-21855807 Theobroma cacao
Thecc1EG033453 1.0kb upstream 1.0kb upstream 10079 true scaffold_7: 21845229-21855307 Theobroma cacao
Thecc1EG033453 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 21845229-21846228 Theobroma cacao
Thecc1EG033453 1.0kb downstream 1.0kb downstream 10079 true scaffold_7: 21846229-21856307 Theobroma cacao
Thecc1EG033453 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 21855308-21856307 Theobroma cacao
Thecc1EG033453 2.0kb upstream 2.0kb upstream 11079 true scaffold_7: 21844229-21855307 Theobroma cacao
Thecc1EG033453 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 21844229-21846228 Theobroma cacao
Thecc1EG033453 2.0kb downstream 2.0kb downstream 11079 true scaffold_7: 21846229-21857307 Theobroma cacao
Thecc1EG033453 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 21855308-21857307 Theobroma cacao
Thecc1EG033453 5.0kb upstream 5.0kb upstream 14079 true scaffold_7: 21841229-21855307 Theobroma cacao
Thecc1EG033453 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 21841229-21846228 Theobroma cacao
Thecc1EG033453 5.0kb downstream 5.0kb downstream 14079 true scaffold_7: 21846229-21860307 Theobroma cacao
Thecc1EG033453 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 21855308-21860307 Theobroma cacao
Thecc1EG033453 10.0kb upstream 10.0kb upstream 19079 true scaffold_7: 21836229-21855307 Theobroma cacao
Thecc1EG033453 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 21836229-21846228 Theobroma cacao
Thecc1EG033453 10.0kb downstream 10.0kb downstream 19079 true scaffold_7: 21846229-21865307 Theobroma cacao
Thecc1EG033453 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 21855308-21865307 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837186 5264 Brassicales-Malvales View MSA
124350617 5266 SBM View MSA
124252655 5268 Malvidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain