Gene : Thecc1EG033890 T. cacao v1.1
Defline:  (1 of 1) PTHR35703//PTHR35703:SF1 - FAMILY NOT NAMED // INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED Genomic Order:  122
Name:  ? Thecc1EG033890 Secondary Identifier:  ? PAC:27458189
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5874 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033890 0.5kb upstream 0.5kb upstream 3581 true scaffold_8: 560630-564210 Theobroma cacao
Thecc1EG033890 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 560630-561129 Theobroma cacao
Thecc1EG033890 0.5kb downstream 0.5kb downstream 3581 true scaffold_8: 561130-564710 Theobroma cacao
Thecc1EG033890 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 564211-564710 Theobroma cacao
Thecc1EG033890 1.0kb upstream 1.0kb upstream 4081 true scaffold_8: 560130-564210 Theobroma cacao
Thecc1EG033890 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 560130-561129 Theobroma cacao
Thecc1EG033890 1.0kb downstream 1.0kb downstream 4081 true scaffold_8: 561130-565210 Theobroma cacao
Thecc1EG033890 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 564211-565210 Theobroma cacao
Thecc1EG033890 2.0kb upstream 2.0kb upstream 5081 true scaffold_8: 559130-564210 Theobroma cacao
Thecc1EG033890 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 559130-561129 Theobroma cacao
Thecc1EG033890 2.0kb downstream 2.0kb downstream 5081 true scaffold_8: 561130-566210 Theobroma cacao
Thecc1EG033890 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 564211-566210 Theobroma cacao
Thecc1EG033890 5.0kb upstream 5.0kb upstream 8081 true scaffold_8: 556130-564210 Theobroma cacao
Thecc1EG033890 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 556130-561129 Theobroma cacao
Thecc1EG033890 5.0kb downstream 5.0kb downstream 8081 true scaffold_8: 561130-569210 Theobroma cacao
Thecc1EG033890 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 564211-569210 Theobroma cacao
Thecc1EG033890 10.0kb upstream 10.0kb upstream 13081 true scaffold_8: 551130-564210 Theobroma cacao
Thecc1EG033890 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 551130-561129 Theobroma cacao
Thecc1EG033890 10.0kb downstream 10.0kb downstream 13081 true scaffold_8: 561130-574210 Theobroma cacao
Thecc1EG033890 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 564211-574210 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837004 5264 Brassicales-Malvales View MSA
124341792 5266 SBM View MSA
124242184 5268 Malvidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain