Gene : Thecc1EG033802 T. cacao v1.1

Defline:  (1 of 1) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Genomic Order:  39
Name:  ? Thecc1EG033802 Secondary Identifier:  ? PAC:27459375

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033802 0.5kb upstream 0.5kb upstream 4303 true scaffold_8: 231965-236267 Theobroma cacao
Thecc1EG033802 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 231965-232464 Theobroma cacao
Thecc1EG033802 0.5kb downstream 0.5kb downstream 4303 true scaffold_8: 232465-236767 Theobroma cacao
Thecc1EG033802 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 236268-236767 Theobroma cacao
Thecc1EG033802 1.0kb upstream 1.0kb upstream 4803 true scaffold_8: 231465-236267 Theobroma cacao
Thecc1EG033802 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 231465-232464 Theobroma cacao
Thecc1EG033802 1.0kb downstream 1.0kb downstream 4803 true scaffold_8: 232465-237267 Theobroma cacao
Thecc1EG033802 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 236268-237267 Theobroma cacao
Thecc1EG033802 2.0kb upstream 2.0kb upstream 5803 true scaffold_8: 230465-236267 Theobroma cacao
Thecc1EG033802 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 230465-232464 Theobroma cacao
Thecc1EG033802 2.0kb downstream 2.0kb downstream 5803 true scaffold_8: 232465-238267 Theobroma cacao
Thecc1EG033802 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 236268-238267 Theobroma cacao
Thecc1EG033802 5.0kb upstream 5.0kb upstream 8803 true scaffold_8: 227465-236267 Theobroma cacao
Thecc1EG033802 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 227465-232464 Theobroma cacao
Thecc1EG033802 5.0kb downstream 5.0kb downstream 8803 true scaffold_8: 232465-241267 Theobroma cacao
Thecc1EG033802 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 236268-241267 Theobroma cacao
Thecc1EG033802 10.0kb upstream 10.0kb upstream 13803 true scaffold_8: 222465-236267 Theobroma cacao
Thecc1EG033802 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 222465-232464 Theobroma cacao
Thecc1EG033802 10.0kb downstream 10.0kb downstream 13803 true scaffold_8: 232465-246267 Theobroma cacao
Thecc1EG033802 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 236268-246267 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825873 5264 Brassicales-Malvales View MSA
124348612 5266 SBM View MSA
124251843 5268 Malvidae View MSA
124072056 5270 Rosid View MSA
123752133 5271 Pentapetalae View MSA
122789455 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain