Gene : Thecc1EG034012 T. cacao v1.1

Defline:  (1 of 1) PTHR35464//PTHR35464:SF1 - FAMILY NOT NAMED // F18O14.9 Genomic Order:  233
Name:  ? Thecc1EG034012 Secondary Identifier:  ? PAC:27457803

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034012 0.5kb upstream 0.5kb upstream 3374 true scaffold_8: 1086893-1090266 Theobroma cacao
Thecc1EG034012 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1089767-1090266 Theobroma cacao
Thecc1EG034012 0.5kb downstream 0.5kb downstream 3374 true scaffold_8: 1086393-1089766 Theobroma cacao
Thecc1EG034012 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1086393-1086892 Theobroma cacao
Thecc1EG034012 1.0kb upstream 1.0kb upstream 3874 true scaffold_8: 1086893-1090766 Theobroma cacao
Thecc1EG034012 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1089767-1090766 Theobroma cacao
Thecc1EG034012 1.0kb downstream 1.0kb downstream 3874 true scaffold_8: 1085893-1089766 Theobroma cacao
Thecc1EG034012 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1085893-1086892 Theobroma cacao
Thecc1EG034012 2.0kb upstream 2.0kb upstream 4874 true scaffold_8: 1086893-1091766 Theobroma cacao
Thecc1EG034012 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1089767-1091766 Theobroma cacao
Thecc1EG034012 2.0kb downstream 2.0kb downstream 4874 true scaffold_8: 1084893-1089766 Theobroma cacao
Thecc1EG034012 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1084893-1086892 Theobroma cacao
Thecc1EG034012 5.0kb upstream 5.0kb upstream 7874 true scaffold_8: 1086893-1094766 Theobroma cacao
Thecc1EG034012 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1089767-1094766 Theobroma cacao
Thecc1EG034012 5.0kb downstream 5.0kb downstream 7874 true scaffold_8: 1081893-1089766 Theobroma cacao
Thecc1EG034012 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1081893-1086892 Theobroma cacao
Thecc1EG034012 10.0kb upstream 10.0kb upstream 12874 true scaffold_8: 1086893-1099766 Theobroma cacao
Thecc1EG034012 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1089767-1099766 Theobroma cacao
Thecc1EG034012 10.0kb downstream 10.0kb downstream 12874 true scaffold_8: 1076893-1089766 Theobroma cacao
Thecc1EG034012 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1076893-1086892 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839921 5264 Brassicales-Malvales View MSA
124339703 5266 SBM View MSA
124253506 5268 Malvidae View MSA
124062164 5270 Rosid View MSA
123740083 5271 Pentapetalae View MSA
122790086 5272 Eudicot View MSA
122043322 5273 Angiosperm View MSA
121347201 5274 Embryophyte View MSA
123427704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain