Gene : Thecc1EG034119 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Genomic Order:  331
Name:  ? Thecc1EG034119 Secondary Identifier:  ? PAC:27457819
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034119 0.5kb upstream 0.5kb upstream 5145 true scaffold_8: 1514387-1519531 Theobroma cacao
Thecc1EG034119 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1514387-1514886 Theobroma cacao
Thecc1EG034119 0.5kb downstream 0.5kb downstream 5145 true scaffold_8: 1514887-1520031 Theobroma cacao
Thecc1EG034119 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1519532-1520031 Theobroma cacao
Thecc1EG034119 1.0kb upstream 1.0kb upstream 5645 true scaffold_8: 1513887-1519531 Theobroma cacao
Thecc1EG034119 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1513887-1514886 Theobroma cacao
Thecc1EG034119 1.0kb downstream 1.0kb downstream 5645 true scaffold_8: 1514887-1520531 Theobroma cacao
Thecc1EG034119 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1519532-1520531 Theobroma cacao
Thecc1EG034119 2.0kb upstream 2.0kb upstream 6645 true scaffold_8: 1512887-1519531 Theobroma cacao
Thecc1EG034119 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1512887-1514886 Theobroma cacao
Thecc1EG034119 2.0kb downstream 2.0kb downstream 6645 true scaffold_8: 1514887-1521531 Theobroma cacao
Thecc1EG034119 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1519532-1521531 Theobroma cacao
Thecc1EG034119 5.0kb upstream 5.0kb upstream 9645 true scaffold_8: 1509887-1519531 Theobroma cacao
Thecc1EG034119 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1509887-1514886 Theobroma cacao
Thecc1EG034119 5.0kb downstream 5.0kb downstream 9645 true scaffold_8: 1514887-1524531 Theobroma cacao
Thecc1EG034119 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1519532-1524531 Theobroma cacao
Thecc1EG034119 10.0kb upstream 10.0kb upstream 14645 true scaffold_8: 1504887-1519531 Theobroma cacao
Thecc1EG034119 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1504887-1514886 Theobroma cacao
Thecc1EG034119 10.0kb downstream 10.0kb downstream 14645 true scaffold_8: 1514887-1529531 Theobroma cacao
Thecc1EG034119 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1519532-1529531 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827961 5264 Brassicales-Malvales View MSA
124344254 5266 SBM View MSA
124238808 5268 Malvidae View MSA
124062180 5270 Rosid View MSA
123741052 5271 Pentapetalae View MSA
122786797 5272 Eudicot View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain