Gene : Thecc1EG034391 T. cacao v1.1

Defline:  (1 of 1) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  581
Name:  ? Thecc1EG034391 Secondary Identifier:  ? PAC:27459056

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034391 0.5kb upstream 0.5kb upstream 6442 true scaffold_8: 2737878-2744319 Theobroma cacao
Thecc1EG034391 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2737878-2738377 Theobroma cacao
Thecc1EG034391 0.5kb downstream 0.5kb downstream 6442 true scaffold_8: 2738378-2744819 Theobroma cacao
Thecc1EG034391 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2744320-2744819 Theobroma cacao
Thecc1EG034391 1.0kb upstream 1.0kb upstream 6942 true scaffold_8: 2737378-2744319 Theobroma cacao
Thecc1EG034391 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2737378-2738377 Theobroma cacao
Thecc1EG034391 1.0kb downstream 1.0kb downstream 6942 true scaffold_8: 2738378-2745319 Theobroma cacao
Thecc1EG034391 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2744320-2745319 Theobroma cacao
Thecc1EG034391 2.0kb upstream 2.0kb upstream 7942 true scaffold_8: 2736378-2744319 Theobroma cacao
Thecc1EG034391 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2736378-2738377 Theobroma cacao
Thecc1EG034391 2.0kb downstream 2.0kb downstream 7942 true scaffold_8: 2738378-2746319 Theobroma cacao
Thecc1EG034391 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2744320-2746319 Theobroma cacao
Thecc1EG034391 5.0kb upstream 5.0kb upstream 10942 true scaffold_8: 2733378-2744319 Theobroma cacao
Thecc1EG034391 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2733378-2738377 Theobroma cacao
Thecc1EG034391 5.0kb downstream 5.0kb downstream 10942 true scaffold_8: 2738378-2749319 Theobroma cacao
Thecc1EG034391 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2744320-2749319 Theobroma cacao
Thecc1EG034391 10.0kb upstream 10.0kb upstream 15942 true scaffold_8: 2728378-2744319 Theobroma cacao
Thecc1EG034391 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2728378-2738377 Theobroma cacao
Thecc1EG034391 10.0kb downstream 10.0kb downstream 15942 true scaffold_8: 2738378-2754319 Theobroma cacao
Thecc1EG034391 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2744320-2754319 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831594 5264 Brassicales-Malvales View MSA
124340100 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain